| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0186 |
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| Symbol | |
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| ID | 8413034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 218518 |
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| End bp | 219582 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645021758 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_003179213 |
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| Protein GI | 257783996 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.448936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTT CAATTGGTAT CGTTGGTCTG CCAAACGTTG GTAAATCTAC GCTGTTCACC
GCACTGACCC GCAAAGGTGG TCTGGCTGCA AACTATCCGT TTGCTACCAT CGACCCTAAT
GTGGGAATTG TTGACGTGCC CGACGCAAGG CTCCAGAAAC TGGCCGAGAT TGTTAATCCT
GGTCGTATTA TGCCTGCAAC CGTTGAATTT GTGGACATCG CTGGCCTGGT CAAAGGTGCA
AACGAAGGCG AAGGCCTGGG CAATCAGTTC TTAGCAAACA TTCGCAACAC CGATGCTATC
TGCGAGGTTG TTCGCTACTT CAAAGACCCT GATGTCATTC ACGTCGAGGG CCGCGTCAAT
CCTGACGAGG ACGTGGACAT CATCCAGACG GAACTTATCC TCGCTGACCT GGGAACTATT
GAGCGTGCTC TGCCTAAACT GGAGAAAGAG GCCAAGCGCG ATAAGGACCT CCAACCCAAG
CTCAACGTGG CAAAGCGCCT TCAAGAGTGG CTGAATGAGG GTAATCGTGC CGCAGACATG
GAGATGACTG ACGAGGAGCG CCTGGCTGCT AGGGATTTGT TCCTGCTTAC TATGAAGCCA
ATCCTGTACG TTGCGAATGT TGACGAAGAC ATGCTCACCG AGCCAGCTCC TGTTATTAAT
GGCGTCCAGT CAATCCCTGT TTGCGCAGGT GTTGAGGCTG AGCTGGCTGA CCTTGATCCA
GAGGAGGCTG CAGAGTACCT GGAGTCCTTG GGACTTGAGC ACTCCGGCTT GGAGACGCTT
GCTCAGGCAG CGTACAAGTT GCTTGGTCTG CAGAGCTACT TCACTGCTGG TCCTATGGAG
GTTAGGGCAT GGACCGTTCG CATTGGCGCC AAGGCTCCCG AGGCTGCTGG CGTCATCCAC
TCTGACTTTG AGCGCGGCTT CATCAAGGCA GAGGTCGCCA GCTACAACGA TTACGTGGAG
CTCGGCGGCG AGGCTGGATG CAAAGCTGCA GGCAAGTTGC GCATTGAGGG CAAGGATTAC
GTGGTCGAGG ATGGCGACGT CATGCACTTC CGCTTTAACG TCTAA
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| Protein sequence | MSLSIGIVGL PNVGKSTLFT ALTRKGGLAA NYPFATIDPN VGIVDVPDAR LQKLAEIVNP
GRIMPATVEF VDIAGLVKGA NEGEGLGNQF LANIRNTDAI CEVVRYFKDP DVIHVEGRVN
PDEDVDIIQT ELILADLGTI ERALPKLEKE AKRDKDLQPK LNVAKRLQEW LNEGNRAADM
EMTDEERLAA RDLFLLTMKP ILYVANVDED MLTEPAPVIN GVQSIPVCAG VEAELADLDP
EEAAEYLESL GLEHSGLETL AQAAYKLLGL QSYFTAGPME VRAWTVRIGA KAPEAAGVIH
SDFERGFIKA EVASYNDYVE LGGEAGCKAA GKLRIEGKDY VVEDGDVMHF RFNV
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