| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0169 |
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| Symbol | |
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| ID | 8413016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 194549 |
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| End bp | 195451 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021740 |
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| Product | 4-(cytidine 5'-diphospho)-2-C-methyl-D- erythritol kinase |
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| Protein accession | YP_003179196 |
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| Protein GI | 257783979 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.096588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAGTA CTCTTATGAC TGCTTCTACG TCTTATAGTG GACGTCAATC CGCACAAGTT
CCTTGCAAGA TTAATCTTCA TCTGGGTATT CATACTCAGA AAAATCAGCG AGGCTATCAT
AAAGTTGATT CACTTATGGT TCCCGTGGCC ATCTACGACA CCGTTACGGT TAACGATGCA
CCGGAGCTTA CGGTAACGCA CGATCCTACA CTCTGCGTTA TACCTGAACG TACAACCACG
TGGAAAGCAG CTGTACTTTT AGCGCACAAG CTGGGAATTT CTCCTGATGT CTCTATTGAC
GTGCATGTAC ACATTCCCGA GAAAGCCGGT TTAGGTGGAT CGTCTGCCGA TGCAGCTGCA
ACGTTGCGCT TGCTTGCTGA GCGTTGGGGG GTTGACTCGT TAGATCCGCT GGTAGTTGAT
GTGGCAAAGT CTGTTGGAGC CGATGTACCG TTCTTCTTGG ATCCGCGTCC TTCTCTTATG
CTTGGTGCTG GCGATACGCT GGAAGAGGCT TATACACCTA CATGTGACGC ACCGCTTGTC
ATTGTATTAC CTGCAGAAAA GGGTATTTTG ACACAGGCCG CCTATGATCA GTTTGATGTT
GCTCCAGAGC CACCAGCATC GTATGAAGCA CTCGCTTCAT TGTTTACTTC TGGCGAGAAA
ACCGTCCAAC AGGTAGCTGA TTTACTGTTT AATAATCTGG CGCCAGCTGC AAAAATACTT
GAACCGCATG TTGCTGAGGT TGAAGCTTGG CTTAAACAGC AGCCAGGTGT TCTTGGGGCT
CAAGTCTCGG GTTCTGGTAG TAGTTCGTTT GCACTTTGCG AGTCTCAGGA TGCAGCGGAC
GCTATTGCTG ACGCTGCTAA GGCAATGGGA TGGCGGGGCT ATTCCACTCA ATGTGAGTTG
TAG
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| Protein sequence | MNSTLMTAST SYSGRQSAQV PCKINLHLGI HTQKNQRGYH KVDSLMVPVA IYDTVTVNDA
PELTVTHDPT LCVIPERTTT WKAAVLLAHK LGISPDVSID VHVHIPEKAG LGGSSADAAA
TLRLLAERWG VDSLDPLVVD VAKSVGADVP FFLDPRPSLM LGAGDTLEEA YTPTCDAPLV
IVLPAEKGIL TQAAYDQFDV APEPPASYEA LASLFTSGEK TVQQVADLLF NNLAPAAKIL
EPHVAEVEAW LKQQPGVLGA QVSGSGSSSF ALCESQDAAD AIADAAKAMG WRGYSTQCEL
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