| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0161 |
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| Symbol | |
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| ID | 8413007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 185681 |
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| End bp | 187828 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021731 |
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| Product | Hydantoinase/oxoprolinase |
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| Protein accession | YP_003179188 |
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| Protein GI | 257783971 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGTTC GTATTGGAAT TGACGTTGGC GGAACATTTA CCGATGCTGT TGCCATCGAC
AATGATACGT ACGAAATTAT CGGCACGGTT AAAACGCCTA CCACGCATAC CGCTGAAGCA
GGTGTTGCTG CAGGTATTGT GCAGGTGCTT CATGATGTGA TGGAGCAGCA TAGCATTAAA
CCCGAAGATG TTGTCTTCAT TGCTCACGGC ACCACTCAGG CCACAAATGC TTTACTTGAG
GGTGATGTAG CTCAGGTTGG TATTGTGACG CTTGGTAGTG GCCTTCAGGG CGCTAAAAGT
AAGAGCGATA CTAATGTTGG AGATATTGAA CTTGCTGCCG GTAAATTCCT GCGTACCAAA
AATGCGTTTG TAGATACGTC TTCTGACGTT GAAGCCGGCA TTAAGAGCGC AATTGAACAG
CTTTTCTCGG ATGGTTCAAC TTCTTATGTT GCAGCTGAAG CATTTAGCGT AGACGATCCA
ACTAACGAGA ATGCCGTTAT TGCAGAATGC TCTGATAGAG AACTTCCTGC TACAGCCACA
AATGACATCT CTAAGCTTTA TGGTCTGGCT ATTCGTACCC GTACAGCAGT TGTTAATGCA
TCCATCATGC CAAAGATGCT TGAAGCTGCA AACATGACTG ACAAGAGTAT TCGTGAGGCT
GGTATTGAGT CGCCACTTAT GGTTATGCGT TGTGATGGTG GTGTAATGAC CGTTGATGAG
GTTCGTCATC GTCCAATCCT TACTATTCTC TCTGGTCCCG CAGCTGGTGT AGCTGGTGCT
TTGATGTACG AGAAGCTTAC CGACGGACTG TTCTTTGAGG TTGGTGGCAC TTCCACCGAT
ATTTCTTGCG TTAAAGATGG CAAGGTTATG GTTAAGTATG CGGAAGTTGG TGGCCATAAG
ACGTATCTCT CGTCATTGGA TGTTAGAACC GTTGGTATTG GAGGCGGTTC TATGGTGCAA
ATTTCTGATG GTAAGGCTGT TGATGTGGGA CCTCGTTCTG CCCACATTGC CAACCTGGAT
TACGAGGTTT ACACCAACGC AGAAAAGATT GTGAACCCAC GTCTGGTTGC TGTTCGCCCT
ATGGATGGAG ATCCTGAATA CGCAGCTATT GAGTGTGATG ACGGTCTTCG TGTTTGCTTG
ACTATGGCCG GCGCAGCAAA TCTTGCGGGC TTTGTTCCTG AGGGCGATTA TGCTTGCGGT
TCTGTTGAAG CTGCTCGTGC GGCATGGGCT CCTCTTGCAG AGAATATGGG TGTGAGTGTT
GAAGAGGCAG CAGCTCAGGT TCTTGCATTT GCCGCAAAGA AGAACGGTGC TGTAGCTGAA
CAACTTATGA AAGACTATGG CATGGACCCT CGTACAACCG TTTACGTTGG CGGTGGCGGT
GGCGCTTCCA CTGTTGTGTC ACACTTGGCA AAGAGCATGG GCCATACCTT CCGTATTGCT
AAGAACGCTC CTGTTATCTC AACTATTGGC GTTGCTCTTG CAATGGTCCG TGACATGGTT
GAGCGTAGCG TTACCAACCC ATCTGACGAT GATATCGTTA GCGTCAGGCG TGAGGCAGAA
GCTCGCGCTA TCAAGATGGG CGCTGCTCCT GGAACCGTTG AGGTTACTGT TGAGGTGGAT
ACACAGCGTC ACGTTGTCCG TGCAATTGCT GTTGGTGCTA CTGAACTGCG TAGTAAAGAT
GTTAATGCCA CACGTCTGAG TGCAGATGAG CTTAAGAAAC TTGTGATAGA GAATCTTGGC
GAGGGTGCAG AAAACGTTTC TGAGGTTGCT CATTCTTCCG AGCTCTTTGC CTATACCGCA
ACCACTACAG AAAAGAAGCT CTTTGGTCTT CTCACCAAGA AACGCACTGC TCTTCGTCTT
ATTGATTCCG AGGGCGTTAT TAGACTTCAG CGTCCTAATG CTGAGGTGCT TCAAGAAACT
ATTAGTTCAT GGCGTAAGGG CGTAACAGCG CTGGTAGAGG ACTTAACTGT ATACAACGAT
GGCGGCGCTA ATCTGCCAAA CGTCTATGTT GTGGTGGGTA AGCGTATCAT CGACCTTTCT
GGAATGACTT CGCTTGAGCA GATCTTGAGC CTTGCAGCGG TAGAGCTGGG CGGTTATTCA
TCTGACGAGC CTGTTATTAT TGCTGCCACA CTTCGTTTGG GCGATTAG
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| Protein sequence | MKVRIGIDVG GTFTDAVAID NDTYEIIGTV KTPTTHTAEA GVAAGIVQVL HDVMEQHSIK
PEDVVFIAHG TTQATNALLE GDVAQVGIVT LGSGLQGAKS KSDTNVGDIE LAAGKFLRTK
NAFVDTSSDV EAGIKSAIEQ LFSDGSTSYV AAEAFSVDDP TNENAVIAEC SDRELPATAT
NDISKLYGLA IRTRTAVVNA SIMPKMLEAA NMTDKSIREA GIESPLMVMR CDGGVMTVDE
VRHRPILTIL SGPAAGVAGA LMYEKLTDGL FFEVGGTSTD ISCVKDGKVM VKYAEVGGHK
TYLSSLDVRT VGIGGGSMVQ ISDGKAVDVG PRSAHIANLD YEVYTNAEKI VNPRLVAVRP
MDGDPEYAAI ECDDGLRVCL TMAGAANLAG FVPEGDYACG SVEAARAAWA PLAENMGVSV
EEAAAQVLAF AAKKNGAVAE QLMKDYGMDP RTTVYVGGGG GASTVVSHLA KSMGHTFRIA
KNAPVISTIG VALAMVRDMV ERSVTNPSDD DIVSVRREAE ARAIKMGAAP GTVEVTVEVD
TQRHVVRAIA VGATELRSKD VNATRLSADE LKKLVIENLG EGAENVSEVA HSSELFAYTA
TTTEKKLFGL LTKKRTALRL IDSEGVIRLQ RPNAEVLQET ISSWRKGVTA LVEDLTVYND
GGANLPNVYV VVGKRIIDLS GMTSLEQILS LAAVELGGYS SDEPVIIAAT LRLGD
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