| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0147 |
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| Symbol | |
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| ID | 8412993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 167367 |
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| End bp | 168692 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645021717 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_003179174 |
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| Protein GI | 257783957 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGT ACGATGTAAT TGAGAAGAAG CGCGATGGAG GCGAGCTTAC CGACGCAGAG
ATTGATTACT TTGTCTCGGG TTATGTAGCT GGTGATATTC CCGATTACCA GGCTTCCGCA
CTTGCTATGG CCATCTTTTA TAAGGGCATG ACCGCGCACG AGACGGCTCA TCTGACTATG
GCGATGGCTG AGTCTGGCGA TATGATGGAC CTCTCGGCAA TTCCTGGTAT CAAGGTTGAT
AAGCACTCTA CCGGCGGCGT TGGCGATAAA ACCACGCTGG TAGTAGCTCC ACTTGTTGCA
TCTCTGGGTG TGAAAGTTGC TAAGATGAGC GGTCGCGGAC TGGGTCACAC AGGCGGTACG
CTTGACAAGC TTGAGGCAAT TCCAGGACTT TCTATTGAGA TTTCCGAGCC CGACTTTTTC
AAGCAGGTTT CCGAGATTGG TGTTGCTGTT GCAGGTCAGA CGGGCAATCT TGTCCCTGCC
GATAAGAAAC TCTATGCGCT GCGCGACGTT ACTGCAACCG TTGACTCGGT GCCTCTGATT
GCGTCAAGTA TCATGAGTAA GAAGATTGCT TCTGGCTCTG ATTGCATTTT GCTGGACGTT
AAGTGTGGAT CTGGTGCCTT TATGAAGGAT GTTGATTCTG CAATTGAGCT GGCAGACGCC
ATGGTTTCTA TTGGTGAACA CGTTAACCGT ACTACTGCTG CGTTAATTAC CGGTATGGAT
CGTCCTCTGG GCAAAAACGT TGGTAACTCC CTTGAGGTCA TTGAGGCAGT GGCAACGCTC
AAGGGCGAGG GCCCTAAGGA TCTGACCGAC GTCTGCATTG AGCTTGCTGC AAACATGCTT
AACCTTGCAG GTAAGGGAAG TGTTGATGAC TGCCGTAAGC TGGCTCGCCA GCAGATTGCC
AACGGCGAGG GTCTGGCCAA GCTAGCTCAG ATGGTCAAAG CTCAGGGTGG TACCGACGAG
GTTATTTTTG ATACCACCAA GTTTGAGGCT GCTCCATTCC GTCGTGATAT TGTGTCCGAG
ACCAGTGGAT ATATCACTTC CATGAATGCT GAGCTGGTTG GTATTTCCTC CGTTGCTCTG
GGAGCCGGTC GCGAGAAAAA GGGTGATCCA ATTGACCCAT CCGCCGGTAT TATCCTCGAG
CGCAAGACGG GCGATTATGT CGAGAAGGGC GATGTCATCG CAACGCTTCT GACTGGTGAC
GAAAGCCGTC TTGATGAGGG CGAGCGCATC TTCCGTGAGG CTCTAGCCTT TGGTGAGAGT
GCACCTGAGT TGGAGCCATT GTTCTTTGCA CGCGTCTCCA AGGACGGTGT TGAGCGTTTC
GCGTAA
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| Protein sequence | MRMYDVIEKK RDGGELTDAE IDYFVSGYVA GDIPDYQASA LAMAIFYKGM TAHETAHLTM
AMAESGDMMD LSAIPGIKVD KHSTGGVGDK TTLVVAPLVA SLGVKVAKMS GRGLGHTGGT
LDKLEAIPGL SIEISEPDFF KQVSEIGVAV AGQTGNLVPA DKKLYALRDV TATVDSVPLI
ASSIMSKKIA SGSDCILLDV KCGSGAFMKD VDSAIELADA MVSIGEHVNR TTAALITGMD
RPLGKNVGNS LEVIEAVATL KGEGPKDLTD VCIELAANML NLAGKGSVDD CRKLARQQIA
NGEGLAKLAQ MVKAQGGTDE VIFDTTKFEA APFRRDIVSE TSGYITSMNA ELVGISSVAL
GAGREKKGDP IDPSAGIILE RKTGDYVEKG DVIATLLTGD ESRLDEGERI FREALAFGES
APELEPLFFA RVSKDGVERF A
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