| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0140 |
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| Symbol | |
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| ID | 8412986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 159752 |
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| End bp | 160942 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021710 |
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| Product | phosphopentomutase |
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| Protein accession | YP_003179167 |
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| Protein GI | 257783950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAAAC GTGTTTTTGT GGTTGTTCTT GATAGTTTTG GCATTGGTGA AGAACCAGAT
GCAGCAGCAT ATGGAGATGA GGGCAGCAAT ACCCTCTGCG CATGCGCAAC TAGCGGAGTT
CTTAATATTC CAAATATGAC AAAGCTGGGT CTTCTTAATA TTGATGGCGC GCTTGATACT
GTCTATGACG TTGATTTGAA GCCAATTGAG TCTCCTATGG GCGCATATGC TCGTATGCAG
GAGAAATCTG CTGGTAAAGA TACCACCGTT GGTCACTGGG AGATGGCAGG CGTCATTTCT
CCAAAGAAGT TCCCAACCTA TCCTGATGGC TTCCCGCAGG AGGTCATTGA GGAGTTTGAG
CAGAAGACCG GTCGCAAGGT TCTGTGCAAT AAACCTTACT CTGGAACTGA TGTAATTAGA
GATTTTGGTA AAGAGCACGT AGAGACTGGT GCTTTGATTG TTTACACTTC AGCAGATTCT
GTTTTCCAGA TTGCTGCACA TGAGGATGTG GTAAGCCCCG AGAAACTCTA TGAGTATTGC
CGCATTGCAC GTGAGATTCT GCAGGGTGAG CATGGTGTTG CTCGCGTTAT TGCTCGTCCT
TTTGAGGGAG AGTGGCCATA TCAGCGCACT TCTCGCCGTC ATGACTTCTC GCTTGAGCCA
ACTGGCACAA CTATGCTTGA CCGTCTCAAG GAGAACGGCT TTGACGTTCT TTCCATTGGC
AAAATTTATG ACATCTTTGC TCATCGTGGT ATGACTGAGT TTGAGTTTAC TACCTGCAAT
GCAGATGGAA TTCAGAAGAC TATTGAGGCT ACCAGTAAAG ACTTTAACGG TCTATGCTTC
ACTAACCTTG TTGATACTGA CATGATTTAC GGTCACCGCA ACGATCCTGT GGGATATTCC
AATGCTCTTT CTTACTTTGA TGAGCATATC CCTCAGATTA TTAAGGGTCT TCGTGAAGAT
GATCTGTTTA TCATTACCGC AGATCATGGC TGTGATCCTG TGACGCCATC TACTGACCAC
TCTCGTGAGT ATGTACCACT GCTTATCACA GGTCCAAAAG TCAAGCCAAA TACTAACCTT
GGTACAACCA CCACATTTGC CGACATGGCC GAGACAATTC TTGATTATTT TGGCGTTGAG
CAACTTGGTG TTGGAACTTC TCATCTATCA GAGATTCTTA AGGAGAATTA A
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| Protein sequence | MPKRVFVVVL DSFGIGEEPD AAAYGDEGSN TLCACATSGV LNIPNMTKLG LLNIDGALDT
VYDVDLKPIE SPMGAYARMQ EKSAGKDTTV GHWEMAGVIS PKKFPTYPDG FPQEVIEEFE
QKTGRKVLCN KPYSGTDVIR DFGKEHVETG ALIVYTSADS VFQIAAHEDV VSPEKLYEYC
RIAREILQGE HGVARVIARP FEGEWPYQRT SRRHDFSLEP TGTTMLDRLK ENGFDVLSIG
KIYDIFAHRG MTEFEFTTCN ADGIQKTIEA TSKDFNGLCF TNLVDTDMIY GHRNDPVGYS
NALSYFDEHI PQIIKGLRED DLFIITADHG CDPVTPSTDH SREYVPLLIT GPKVKPNTNL
GTTTTFADMA ETILDYFGVE QLGVGTSHLS EILKEN
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