Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0136 |
Symbol | |
ID | 8412982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 154613 |
End bp | 156115 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645021706 |
Product | hypothetical protein |
Protein accession | YP_003179163 |
Protein GI | 257783946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.619185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGT TCATGGACAT CATCACTTCC GACAACCTCT CGTACAAGCA GAAGGTTCTG CACCTGGCTC AGGCCGCCGA GAACTCCGAG CACCCCATCA AGACAACCGC TGAGTTTGAC CGTCTTTTTA AAGCTCACGC TATTGATGAC ATGTGTGAAG GCAACGCTCC TTACCGTCCT CGCTACATCT GCCCTGACTA CCAGGTGTTT GCTCAGAACG GCTCCGAGTT TTTGCGCTTT GACAAGCCAG AGAACCTAGA TGACCTGCTC TGGGGCCTTG CCACTCTCTA CGATAACGTC CCTTCCGTCA CCAGCCGCCC TGTGTACGTT GGCCAGCTGG ACAAGATTAT TGATCCTTTT TTGGAAGGCA TGACTGACGA TGAGATTAAG CCTCGTCTTC GCCGCTTCTT AAACCATATC GACCGCACCG TTGCAAGTGG TTACTGCCAC GCAAACATTG GTCCAGAGGA CACTCGCGCA GGTCGACTGC TGCTTGAAGT TGAACGCGAG CTCATGAACG CAGTTCCAAA CTTCACTCTT AAATACGACC CAGAGATCAC ATCAGACGAG TTCATGCGCC TGGCAGTAAA GACCACCATG GTCTGCTCCA ACCCTGCTTT TGCTAATCAC CGCATCCATA AAGAGACCTA TCCTGGTGAG TACACAGTTG TCAGCTGCTA CAACGTCCTC CCAATGGGCG GCGGCGCTTA CACCCTAAGC CGCGTTCTTC TCCCCGGTCT CGCAAAACTT GCAACCAACG TTGACGACTT CATGAACAAC CTGCTACCAA CCGCAACCAG CGAGGTACTG AACTTCATGA ACGAGCGTGT CCGCTTTATC GTCGAGGATT CTAACTTCTT TGAGACAAGC TTCCTGGCTA AGGAAGGTCT CATTTCTCGT GATCGCTTCT GCGGCATGTT TGGCGTTGCT GGCATGAGCG AGTGTGTCGC CGAGCTGCTG CACCTTGATA GCAGCCGAAC CTACGGCAAG GATGACGAGG CCAACGAGCT GGCAGACCAG ATCATGGTCA AGATTGCTGA CCAGGTCAAC AGCTTTGATG CCGTCTACTC CGAGGTCTTT GGCGGCCGCT TCACCCTGCA CGCACAGGCT GGTTTCTCCG ACCAGAAGGG CGTTACCCCG GGTGTCCGCA TTAAGGTTGG CGACGAGCCT GCAAACCTCT ACGACCACAT TCGCCATAGT GCACGTATGC ATCGCTTTTT CAACAGTGGT GTCTCCGACA TCTTCCCAGC TGAGCCAACC GCTGAGCGCA ACCCAGACGC CGTCATTGAC GTGGTCAAAG CTGCATTCTC CATCGACGAC AAGTACCTCT CGTTCTATAG CTCCGAGGGT GACCTGGTCC GTATTACCGG CTTCTTGGCA AAGCGCTCAG AGATGAAGAA GTTCCAGTCC GGCAACGTTG TTCTTCAGGA CACCGCTCAC GACGGCCTAG GCAACTTCAC CGCCAACCAC CTTGCCGACC GCAAGGTTCG CATGAGCAAC TAG
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Protein sequence | MSEFMDIITS DNLSYKQKVL HLAQAAENSE HPIKTTAEFD RLFKAHAIDD MCEGNAPYRP RYICPDYQVF AQNGSEFLRF DKPENLDDLL WGLATLYDNV PSVTSRPVYV GQLDKIIDPF LEGMTDDEIK PRLRRFLNHI DRTVASGYCH ANIGPEDTRA GRLLLEVERE LMNAVPNFTL KYDPEITSDE FMRLAVKTTM VCSNPAFANH RIHKETYPGE YTVVSCYNVL PMGGGAYTLS RVLLPGLAKL ATNVDDFMNN LLPTATSEVL NFMNERVRFI VEDSNFFETS FLAKEGLISR DRFCGMFGVA GMSECVAELL HLDSSRTYGK DDEANELADQ IMVKIADQVN SFDAVYSEVF GGRFTLHAQA GFSDQKGVTP GVRIKVGDEP ANLYDHIRHS ARMHRFFNSG VSDIFPAEPT AERNPDAVID VVKAAFSIDD KYLSFYSSEG DLVRITGFLA KRSEMKKFQS GNVVLQDTAH DGLGNFTANH LADRKVRMSN
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