Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0075 |
Symbol | |
ID | 8412918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 85209 |
End bp | 86192 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645021642 |
Product | homoserine O-succinyltransferase |
Protein accession | YP_003179102 |
Protein GI | 257783885 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1897] Homoserine trans-succinylase |
TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATTA ATATTCCAGA TGGTTTACCA GCTAAGAAGA CACTGCAAGA AGAGCGCATT TTTGCGCTTG AGGAGGAAGT TGCAGAACAC CAGGAGATTC GCCCGCTTCG CCTGGCAATT TTGAATTTAA TGCCTAAGAA AATTCAGACT GAGACACAAA TTCTCCGCCT GATTTCAAAG TCTCCTATTC AGGTGACGTG TGACTTTATG CGTATCTCTT CGCATGAATC TAAAAATACT TCCGCCGACC ATTTGGTTAC GTTTTATTCA ACTTTTGATG ACTTCAAAGA TAAAAATTAC GACGGTTTGA TTATTACAGG TGCTCCTATT GAGGACCTCA AATACGAAGA CGTAGACTAC TGGGATGAAT TTTGTCGCAT TGTTGACTGG TCTCAGGAAC ATGTCTTTTC CACCATGTAT CTGTGCTGGG GCGCACTAGC TGGCCTGTAC TACTTGCACG ACATCCCAAA GAAGATACTA GGAGCTAAGC TCTTTGGTAT TTTTCCGCAG CGTTTATGCG ACGAGTATTG CTTTCTTACC AATGGATTTG ACGAGGTACA TTACATGCCG CATTCTCGTC ATGCCGCGAT TGAGACATCA GCTCTAGTAA ATCATCCCGA GCTTGCTGTG CTTTCTGAGG GATTTACCAG TGGCCCTGCG CTTCTCGTTA CTAGAGATTT CCATGAGATT TTTGTAACCG GTCATTTTGA ATATGACCGT GACACTCTTG CAGAAGAGTA TTGGCGTGAC TTCCACAAAG GCCTGCCTAT TCGTTTGCCA GAGAATTATT TTCCTGACAA CGATCCAGAA AAGCAGCCGC TGTTCACCTG GCGTGCTCAT GCTAATTTGC TGTATCGCAA CTGGATTAAC TGGGTGTATC AGATGACGCC GTACAATACA AATAAGATAC CTGCGGCTAT TACAGATCTT CATCAGCGTG TTGTCGAGGC CGATCCTGAT GCAAGGATGA CCGGTAGGTT CTAG
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Protein sequence | MPINIPDGLP AKKTLQEERI FALEEEVAEH QEIRPLRLAI LNLMPKKIQT ETQILRLISK SPIQVTCDFM RISSHESKNT SADHLVTFYS TFDDFKDKNY DGLIITGAPI EDLKYEDVDY WDEFCRIVDW SQEHVFSTMY LCWGALAGLY YLHDIPKKIL GAKLFGIFPQ RLCDEYCFLT NGFDEVHYMP HSRHAAIETS ALVNHPELAV LSEGFTSGPA LLVTRDFHEI FVTGHFEYDR DTLAEEYWRD FHKGLPIRLP ENYFPDNDPE KQPLFTWRAH ANLLYRNWIN WVYQMTPYNT NKIPAAITDL HQRVVEADPD ARMTGRF
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