Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0063 |
Symbol | |
ID | 8412905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 70763 |
End bp | 71965 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645021629 |
Product | beta-lactamase domain protein |
Protein accession | YP_003179090 |
Protein GI | 257783873 |
COG category | [C] Energy production and conversion |
COG ID | [COG0426] Uncharacterized flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAGTT CTGTCGAAAT CAAACCCGAT GTCTACTTTG TAGGCGCCCT GGACTGGAAC GCTCGCGAGT TCCACGGTTA TACCACTGAG CGGGGTATTA CCTACAACGC ATATCTTATT TTGGACGAGA AAATCACGCT TATTGATACT GTCAAGCGTC CATTTTCCGA GGAGCTGGTC GAGCGCATCA AGAGCATTAT CGACCCAGCA AAGATTGACG TTCTAATTTG TAATCACATT GAGATGGACC ACTCCGGCAG TGTTCCTCGT ATTCTGGAGC TTGCACCAAA CGCCGAGGTC TACGCAAGCG CACCTCAGGG AGTCAAGGAG CTCAAAGCTT TCTATGGCGA GAATATCAAT GTCAACGGCG TAAAGACGGG CGATACGCTC AACATTGGTA AGCGCACTCT AACCTTCGTG CAGACCCCAA TGGTTCACTG GCCAGACAAC ATGGTCACTT ATTCCGACTA CGATAAGATT CTCTTCTCCA ACGATGCGTT TGGTCAGCAC TATGCTTCAA GCACTCGTTT TGAAGACGAG TCAGACTATT GCGAGGTTAT GAAGCAGGCT CGCAAGTATT ATGCAAACAT CGTTCTTCCT TACGGTCGTC AGGCTGACTC TGCTGTTACT GCAGTTAAGG GTATTGGTCT GGAGAACATT GATATTATCG CTCCAGCTCA CGGTGTTGCA TGGCGTTCTC ATATTGCCGA TATCATCTCC AAGTACGAGG AGTGGACATC GGGTAAGCTT GAGGAGAAGG CCCTGGTTGT GTACGACTCT ATGTGGGGTT CAACCGACAA GATGGCTCAC GCTCTTCTCG ACGGTTTCTT GGCTGAAGGT ATTCCTGTTC AGCTCATCGA CCTTAAAGAG ACTCACATCT CCGACGTTAT GTATCACTTC CTGGATTCAA AGTATGTCTG TGTCGGTTCA CCAACGCTGA ACTCTAAATT CCTGCCTACC GTTTCTTCAT TCCTAACCTA TATGACTGGT CTTTCCCCAA AGAACGATCA TCGCATTGGC TTTGCATTTG GCTCTTACGG TTGGGCTCCA CTTGGGCCAA AGATGGTTCA GGCTGAGCTT GAGGTGGCAG AGTTTACCAT GCCACTGCCC GCTCACGCTA TCGGTTGGAT TCCTTCCGAC GAAGATTTAG ATGCTGTTCG CGCTCAGGTC AAAGATCTGG TTGAGGCTGG TAAACAGCTG TAA
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Protein sequence | MLSSVEIKPD VYFVGALDWN AREFHGYTTE RGITYNAYLI LDEKITLIDT VKRPFSEELV ERIKSIIDPA KIDVLICNHI EMDHSGSVPR ILELAPNAEV YASAPQGVKE LKAFYGENIN VNGVKTGDTL NIGKRTLTFV QTPMVHWPDN MVTYSDYDKI LFSNDAFGQH YASSTRFEDE SDYCEVMKQA RKYYANIVLP YGRQADSAVT AVKGIGLENI DIIAPAHGVA WRSHIADIIS KYEEWTSGKL EEKALVVYDS MWGSTDKMAH ALLDGFLAEG IPVQLIDLKE THISDVMYHF LDSKYVCVGS PTLNSKFLPT VSSFLTYMTG LSPKNDHRIG FAFGSYGWAP LGPKMVQAEL EVAEFTMPLP AHAIGWIPSD EDLDAVRAQV KDLVEAGKQL
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