Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0033 |
Symbol | |
ID | 8412875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 40777 |
End bp | 42270 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645021602 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_003179063 |
Protein GI | 257783846 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTC ACGAGGAATG TGGCGTCTTT GGTGTATGGG CGCCTGACCG TGACGTTGCT CGACTCACTT ATTTTGCGCT GCATGCGCTG CAGCATCGCG GGCAAGATTC CGCAGGTATA GCCGTTGGTG ATGGGCAGAC CGTGCTTATC AGAAAAGACA CGGGCCTTGT AACTGAAGTT TTCAACAACG ATGATCTCAA CGCAATGCCA GGTAAAGTGG CTATCGGTCA CTGTCGCTAT GGTACCGCGG GCGCCAAAGG CTGGGAATCG GCTCAGCCGC ACATGTCGTC CATCGATGAG ACCCTCATTG CTCTGGCGCA CAACGGCACT CTTGTTAACT TTGACTCCTT GCGGGAGGAA CTATCTTCTC GCCAGATTTC CTTTAGATCA AACACGGATT CCGAGGTAGC GGCCCAGCTT ATTGGCTACT TCACACATCA AACGCATCGA CTGCGTACCG GCATTGCCGC AACTATGAAC CTTATCGAGG GCGGCTATGC TATGGTGCTT ATTCGTGAGA ACGCTCTCTA CGCGTTTAGG GATCCTAACG GTATTCGTCC GCTGGTACTT GGCTATATTG GCGAGAAGAA CCAGAATAAC TGGGTGGTTG CATCTGAGAC ATGTGCGCTG GATATTGTGG GTGCAACGTA TGTACGTGAG GTTGCCCCTG GCGAAATTAT TCGCATATCA GACAACGGTC TGTCTTCTGA GATGGGACTT TCTCCTCGTC AGCAGGCAGA TTGTATTTTT GAACAGGTGT ATTTCTCGCG CCCTGATTCT ATTATTAGCG GTCGCTCAGT GTATTCTGTT CGTCATCAGA TGGGTCGACA ACTGGCAAAA GAAACACCAG CAAATGTTGA TCTGGTAATT GGTGTACCGG ATTCTGGCGT TCCTGCAGCC GAAGGTTTTG CACAAGAGTT GGACGTGTCA TTTGCTACCG GCTTAATTAA AAACCGCTAC GTTGCAAGGA CGTTTATTCA ACCTACACAG CAGCTTCGTG AGCTGGGTGT TCGACTCAAG CTCAATGCAC TGTCCGACGT TGTTGCAGAT AAGCGCATTG TGATGGTGGA TGATTCGGTT GTTCGCGGCA CTACCTCAAA GCAGATTGTT CAGCTGCTCA GAGATGCAGG AGCTACAGAA GTGCACGTCA GAAGCGCTTC TCCTAAGGTT GCGTGGCCAT GCTTCTACGG TATTGATACT GCTGACCAAG ATCAGCTTGT TGCAGCAAAA ATGAGCACAG AGGAAATTTG CGAGTATATC GGTGCAGACT CTTTGGGCTT CTTAAGCATT GAAGGTCTGC TTGCATGCGT GCCATCAAGG GGTTATTGCG AGTCATGTTT TAATGGCAGG TATCCTGTAG CAATTCCAAA AGACTTCCAT GGAAGGTTTT TGCCAGAAAA CACACCAGAC AATCTGAATC CGTCTTTTGC ACTAAAATTT GACCAGGTAG AACAGCAGTT AATTGACGAG GGTCTTATGC CCTCAGAGCA GTAA
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Protein sequence | MELHEECGVF GVWAPDRDVA RLTYFALHAL QHRGQDSAGI AVGDGQTVLI RKDTGLVTEV FNNDDLNAMP GKVAIGHCRY GTAGAKGWES AQPHMSSIDE TLIALAHNGT LVNFDSLREE LSSRQISFRS NTDSEVAAQL IGYFTHQTHR LRTGIAATMN LIEGGYAMVL IRENALYAFR DPNGIRPLVL GYIGEKNQNN WVVASETCAL DIVGATYVRE VAPGEIIRIS DNGLSSEMGL SPRQQADCIF EQVYFSRPDS IISGRSVYSV RHQMGRQLAK ETPANVDLVI GVPDSGVPAA EGFAQELDVS FATGLIKNRY VARTFIQPTQ QLRELGVRLK LNALSDVVAD KRIVMVDDSV VRGTTSKQIV QLLRDAGATE VHVRSASPKV AWPCFYGIDT ADQDQLVAAK MSTEEICEYI GADSLGFLSI EGLLACVPSR GYCESCFNGR YPVAIPKDFH GRFLPENTPD NLNPSFALKF DQVEQQLIDE GLMPSEQ
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