Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0013 |
Symbol | |
ID | 8412853 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 17270 |
End bp | 18705 |
Gene Length | 1436 bp |
Protein Length | |
Translation table | |
GC content | 48% |
IMG OID | 645945277 |
Product | |
Protein accession | |
Protein GI | |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.357634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCG TTGCTGTATG CGCTTGCACA GTTGGAATTG CTCATACCTG GATGGCAAAA GAGGCTATCG AGAAAGAATG TGAGCGTCGT GGCTATGAAT ACAAAGTTGA AGCTCAAGGC GGTTATGGTA TTGAGAATGA GCTTGAGCAG GATGAAATTG ACGCCGCTGA CGTTGTTCTT CTCGCCATTG CAATTGGTAT TGAAGGCGAC GAGCGTTTTG ACGAGAAACG CGATGAAGGT CGTGTTCTTA CGCTAGACCC ATCGCTTGCC ATTGCAGATC CAGCAAAGGT TATTGATCAG GTAGTTGCGC TGGCTGAGTA GCAAGCGCGC AAGTAATAAT GCAAGGAAGA AGAGAGGAGA AACCCATGGC AGAGGAAAAG AGTCCCTCAG TTTTGGGCAA GGTTGGAAAA GACCTTCTTA AGGCGTTTAA CACTGGTGTT TCGTACTTTA TTCCTATTGT CGTAGTTGGC GGAGTCTTCT TGGCTTTCTC GCTTGCTACA GGTACAGCAG GAAAAGACGG TATTGAAGTC ACCAATCCTT TGATGCAGAG CCTCAACCTT ATTGGTATGG CTGGCATCAA GATGATGATT CCTGTCCTTG CTGCGTACAT TGCCTATTCT TTGGGCGGAA AGCCTGCTCT GGCGCCTGGC TTTGTCCTTG GTTACCTTGC AAGTAATCCT GTTCCTGTAG GCGAAGTTCA GGTTTCTACT GGCTTCTTGG GTGCAATGGT CCTTGGTGTT GCTGCTGGTT ACCTTGTCCA GTGGATGAAG AGCTGGAAGG TCAACAGCAC TATCCGTACC ATCATGCCAA TTCTGATTAT TCCAAGCTTG TCTTCGCTGG CTCTTGGCAT GCTCTACATC TACGTTTTGG CAGCTCCACT TGGTGCATTC ATGGACTGGC TGACAAGCCT GCTTTCAAGT CTTCAAGGTG GTTCCGCAGT TGTACTCGGT ATCGTAATTG GTCTTATGAC TGCATTTGAC ATGGGCGGCC CAGTTAATAA GACTGCTTCT ACCTTTACCA TGGCTCTTAT GACCGCAGGT GTTTATGGTC CTAACGGTGC ATTCCGTGTT GCAGTTGCTA TTCCTCCACT GGTCTGCGGT GTTGCATCTC TTATTGCTCG CAGCAAGTTT GACGATACTG ATAGGCAGAT GGGTATCTCC GCAGTCTTCA TGGGACTCAT TGGTATTACT GAGGGCGCAA TTCCATTTGC AGTTAAGGAC CTTGCACACA CCTTGCCTGC AATCATGATT GGTTCTGCAG TTGGTGCTGG TCTTGCTGCC TGGCATGGTA TTGAGTGCTT TGTTCCTCAC GGCGGCATGA TTGTTGCTGC AGCTACAAAT AATATTGCCC TCTATACCCT TGATATGGCA ATTGGTGTTG CAGTAGGTGT TGCAATCCTT GTTCTTACCA AGCCAAAGCT TGAGGACAAC AAGTAA
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Protein sequence | |
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