Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0002 |
Symbol | |
ID | 8412840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 1200 |
End bp | 2729 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 645021568 |
Product | chromosomal replication initiator protein DnaA |
Protein accession | YP_003179033 |
Protein GI | 257783816 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.988303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGCAT CAATTGATTC AGACGCAATA GCTCTATGGC AAGATGCAAT AGACCTCTTG GTTGAAGAGA ATCAACCAGA GGCTTTTATC GCTATGTTGA GAACATGCAC GCCAATTAAA GTTGAAGATG ATACTTTGTA CGCTGAGACT TCAATGCGCT TGGCATATAA CCGTATTCTT AAAAACTTAC CTATTGTCGA AAGATGTCTC TCGGCAGCTG CTTTTGAAGA TGTTATTTTG AGTCTTACTC TTACAAAGTC TTCTACTCCT GTTACAACTA CTTCCACAAT GACTCCTCAA GAGTTCAATG CCTGGAAGCA AAAAACTACT CCTATACAAG CAGTTGTTCC TGAACAGATT CAAGATTTTG AATCCCAAGA ACAGAGCCTT GAAGAATTAA AACAACAGAC GTTAAAACGC CGTAAGAGTA ATCCTCTCTA TGAAGAAACA TCCTTCAATT CAAATCTTAC GTTTGATCGC TTTGTTGTTG GTGATGAGAA TGAGCTTGCC CATCAACATG CATTAAATGT TGCAAACGAC GCAAAAGGTA AAGCAAATCC ACTTTTTATT TATGGTGCAA GTGGTCTTGG AAAAACCCAC CTTCTGCGTG CGGTTCAAAA CTACATTAAT TCTGAAGACA TCGAGCGCGT TTGCGTTTAT AAGGACGCTG ATGCTTTTGT TGATGACTAC GTAAATGCTG TTCGTAAAAA TGCATCAGGT AATGCTGCAA CTGAACTCAA TAATAACTAC CAAAATATCG ATGTACTTAT TATCGACGAC GTTCAAAAAC TTGCTGGTAA GGCAGGTACT ATTAATTTCT TCTTCAATAT TTTTAATTCT TTAATTGATA GAGGTAAACA GATTATCCTT GCAGCTGATA GAACTCCAGC GCAGCTTGGT ATGGGTTCTG ATGGCTTTGA TGACCGCATT ACTTCACGTA TGAGTGGTGG CATTGTTATT GGTATTGAAT CTCCAAGTTA TGAGATGAAA CTCAATCTTA TTCATGTCTT CTGCGACCGA GCTTTTAAAG AAAGAAATTC TTCTCTTTCT GTAGATGATA TGCCAGAAGA AATTAGTCGT TACATGGCTG ATAAGGCAGG TCAAAGTATC AGAACGCTTG AGGGTTTCTG TAATCGTTGT GTCACCGGAC AAATCAAAGC AAAAGAATCT GGTAAAAATA TTAAACAGGA AGAAATAGAT AAGATTGCAG ATACGCTCTG GCGTCGTGTT TCAAAAACCG TAAATATCGA AAAGGTCCAA GAAGTTGTAG AGAATATCTA CGGTATTAAC CATCGTGATA TTGTTGGTAA TAAAAGAAAT AAAGAAATTG CAGAACCACG CCATGTTGCA ATTTATCTTG CACATGATCT TTGCCAATAT ACGCTGGTAA ATATTGGTAA GCATTTTGGT GGAAGGAAAC ACGCAACAAT TTTGCACAGT ATTGAGGTAA TCGAAGAAAA AATCAAAGAA GATAAAAGCT TCTATGATCA GATTTCTCAA CTCAAGAAGA CTATCCTTGA ACAAAGTTAG
|
Protein sequence | MDASIDSDAI ALWQDAIDLL VEENQPEAFI AMLRTCTPIK VEDDTLYAET SMRLAYNRIL KNLPIVERCL SAAAFEDVIL SLTLTKSSTP VTTTSTMTPQ EFNAWKQKTT PIQAVVPEQI QDFESQEQSL EELKQQTLKR RKSNPLYEET SFNSNLTFDR FVVGDENELA HQHALNVAND AKGKANPLFI YGASGLGKTH LLRAVQNYIN SEDIERVCVY KDADAFVDDY VNAVRKNASG NAATELNNNY QNIDVLIIDD VQKLAGKAGT INFFFNIFNS LIDRGKQIIL AADRTPAQLG MGSDGFDDRI TSRMSGGIVI GIESPSYEMK LNLIHVFCDR AFKERNSSLS VDDMPEEISR YMADKAGQSI RTLEGFCNRC VTGQIKAKES GKNIKQEEID KIADTLWRRV SKTVNIEKVQ EVVENIYGIN HRDIVGNKRN KEIAEPRHVA IYLAHDLCQY TLVNIGKHFG GRKHATILHS IEVIEEKIKE DKSFYDQISQ LKKTILEQS
|
| |