| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_4284 |
|---|
| Symbol | |
|---|
| ID | 6784299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | + |
|---|
| Start bp | 4825273 |
|---|
| End bp | 4826616 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 642765751 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_002136616 |
|---|
| Protein GI | 197124665 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCCC TCGCCGCCGC GCTCCTCCTC GCCCTCGCCT CCGCGACGCG CGCCCAGGCC
CCCATCACGC TCGACGACGC GCTCGCGCAG GCCGCGCGCG CCAATGCCGA CCTCTCCATG
GCCCGCGCCG ACCGCGGCAT GGCCGCCGCC GACCGCGGCC AGGCGCGCGC CGCGGTGCTG
CCGCGCCTCG ACCTCGACGC GGGCTTCGGC CACAGCTTCA TCGGCCGCTC CACCGGCGCC
GGTGCGCTCA TCGACCCGAT CACCGGGCAG GTGACCGTGG TCGGCGCGGC GAGCGACTCC
GAGGCCTACA GCGCCTCGCT CTCGCTCTCG CAGCCGCTCT TCGACTGGGC CCGCTTCAAG
GATCTCGACC GCGCCCGCTG GGGCGCCCGC GCCAGCGACC GCGGCTACGA CGAGACCGCG
CTGTCCGTCT CCTTCGAGGT CACCCGCCGC TTCTACGACC TCGTGAAGCA GGAGCGGAGC
CTCGAGGTGC TGCAGAAGAC CGTGACGCGC TCGCAGGAGC TGGTGGACCG CGCCGAGGCG
CTGTTCACCG CCGGCCGCGC GCCGAAGAGC GACACCTACT CGGCCCGGGT GAACCTGCAG
AACGACCGGA TCGCGGTGGA GGGGCAGCGC ATCCGGGTGG CGCAGGCGCG CACCGCGCTC
GCCCAGGTGC TCGGGCGCAT CGACGCCGAG GCGATCTCGG TGGTGGCGCC CGCCGCGATC
GACGCGCCCG GCGTCCCCGG CGCCGAGCCT CCCCCGGCCG ACGCGCTCCT CGCCCGCGCC
CGCGAGCGCC GCCCGGCGGT GCTGGCCCAG GCGGCCTCGG TGCACGCGGC CCGCGCCGGG
GTCGGCGGCG CGCAGGCCGG CTACCTGCCC ACGGTCTCGG CGGTGGGCTC CTACGCGCGG
CAGGGCACGG TGCTCGGCGG CCAGGGCGGC GTCTACGGCG ATCCCGCGCG CGACTACAGC
GCCTCCGCCC AGGTGGTCCT CTCCTGGAAC CTGTTCGAGG GGTTCGGCAC CTCCGCCCGC
GTGCAGCGCG CCTCGGCCTC GCTCGACCGC GCCCGCGCCG ACGAGGACCG CACGCTGCAG
GCGGTCGCGA AGGAGATCGG CGACGCGCGG GCGGCGACGG TGGCGCTCGC CCGGCAGGTG
GCGCTCGCCA CCGACACGCT CACCATCGCG CAACAGTCCC TGGCGCTCGC CACCGAGCGG
CTGGAGGCGG GCCTCGCCAA CCAGCTCGAG CTCCGCGACG CCAATCTCAA GCTGACGCAG
GCGGAGCTCT CGCTCCTCGA GTCCCGCATC GATCACGCCG TGGCGGTCGC CGACCTGGCG
CGCGCCGCGG GAGGAACGCT CTAG
|
|---|
| Protein sequence | MRSLAAALLL ALASATRAQA PITLDDALAQ AARANADLSM ARADRGMAAA DRGQARAAVL
PRLDLDAGFG HSFIGRSTGA GALIDPITGQ VTVVGAASDS EAYSASLSLS QPLFDWARFK
DLDRARWGAR ASDRGYDETA LSVSFEVTRR FYDLVKQERS LEVLQKTVTR SQELVDRAEA
LFTAGRAPKS DTYSARVNLQ NDRIAVEGQR IRVAQARTAL AQVLGRIDAE AISVVAPAAI
DAPGVPGAEP PPADALLARA RERRPAVLAQ AASVHAARAG VGGAQAGYLP TVSAVGSYAR
QGTVLGGQGG VYGDPARDYS ASAQVVLSWN LFEGFGTSAR VQRASASLDR ARADEDRTLQ
AVAKEIGDAR AATVALARQV ALATDTLTIA QQSLALATER LEAGLANQLE LRDANLKLTQ
AELSLLESRI DHAVAVADLA RAAGGTL
|
|---|
| |