| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_2880 |
|---|
| Symbol | |
|---|
| ID | 6785033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 3221755 |
|---|
| End bp | 3222876 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642764354 |
|---|
| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
|---|
| Protein accession | YP_002135233 |
|---|
| Protein GI | 197123282 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.607706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCCGT TCAACAAGCC GGTGTGGCTG GGCACCGAGA TCCTGCGCAT CACCGAGGCC
ATCACCACGC ACGGGCACGT CGCGGGCGGC GGGCCCTTCG CGCGCGCGTG CGAGGAGAGC
CTCGCGCGGA TGCTCGGGCA GCCGGCGCTC CTGGTCACCT CGTGCACGCA CGCGCTCGAG
ATGGCGGCGC TGCTGCTCGA CGTGAAGGAG GGGGACGAGT TCATCGTCCC TTCCTACACG
TTCGTCTCCA GCGCGAACGC GTTCGTGCTG CGCGGCGCGC GCCCGGTGTT CGCCGACGTC
GATCCGAACG GAAACCTGGA TCCGCGGGAG GTGACGCGCC TCCGGACGCC GCGCACCCGC
GCGGTCGTGG CGGTCCACTA CGCCGGCAGC TCCTGCGACA TGAGCGACCT GCTCGACCGC
TGCGGCCGGA TCCCGCTGGT GGAGGACGCG GCCCAGGCGC TCGGGGCCAC CTTCGACGGC
AAGCCGCTCG GCACGTTCGG CGTCGCCGGG GCGATCAGCT TCCACGAGAC GAAGAACGTG
GGCTGCGGGG AGGGCGGGGC GCTGACCGTG GCCGATCCCG CGCTGCTGGA GCGGGCCGAG
TACCTGCGCG ACAAGGGCAC CAACCGGCGC CGATTCCTGA CCGGCCTCGT GGACAAGTAC
ACCTGGGTGG ACGTGGGCTC CAGCTACGCG CTCTCGGACC TGAACGCCGC CTACCTGTCG
GCGCAGCTCG ACGCCTTCGA GCGGATCCAG GCGCGACGCG CGACGCTCCA CGATCGGTAC
GTCCGCGAGC TGGAGCGGGC GGTGGAACGA AAGGGCGGGT ACCTGGTGCG CCCGGACCCG
CGGAACCGCC CGAACCACCA CCTGCTGGGC CTCGTGCTCC GCGCGCGCGA GCAGCGCGAC
CGGTTCATCG CGCACATGAA GGCGCACGGG ATCACCACGC CGTTCCACTA CGTCGCGCTC
CACCTCTCGC CCATGGGGAA GCGCTTCCAC GGCGGCGAGC CGCTGCCCGG CGCGGAGCGG
CTCACCGACT GCCTCGTCCG CCTGCCGCTG TTCTTCAACA TGACGGACGC GGAGCAGGAC
GAGGTCATCG CGCGGACGCT GGAGTTCGTC GACGGGCTCT GA
|
|---|
| Protein sequence | MIPFNKPVWL GTEILRITEA ITTHGHVAGG GPFARACEES LARMLGQPAL LVTSCTHALE
MAALLLDVKE GDEFIVPSYT FVSSANAFVL RGARPVFADV DPNGNLDPRE VTRLRTPRTR
AVVAVHYAGS SCDMSDLLDR CGRIPLVEDA AQALGATFDG KPLGTFGVAG AISFHETKNV
GCGEGGALTV ADPALLERAE YLRDKGTNRR RFLTGLVDKY TWVDVGSSYA LSDLNAAYLS
AQLDAFERIQ ARRATLHDRY VRELERAVER KGGYLVRPDP RNRPNHHLLG LVLRAREQRD
RFIAHMKAHG ITTPFHYVAL HLSPMGKRFH GGEPLPGAER LTDCLVRLPL FFNMTDAEQD
EVIARTLEFV DGL
|
|---|
| |