| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_2873 |
|---|
| Symbol | |
|---|
| ID | 6785026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 3210967 |
|---|
| End bp | 3212469 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642764347 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002135226 |
|---|
| Protein GI | 197123275 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.354363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAACG TGCAACCTGC CGGAGCGCCG CCGCCCCCGA CCCCCGAGGA CGAGACGCCG
GCGCCGGCGC TCGAGCAGCT GGGCCGCCGC GTCGCCAGGG GCTCGGCGTG GGTCGCGGTC
GGCTACGGCG CGAGCCAGGT CGTTCGCTTC GGCGCGAACC TGGTGCTGAC GCGCCTCCTG
TTCCCACGCG CGTTCGGGCT CATGCTCCTC GTCAACGTGT GCCTGCAAGG GGTCCACCTC
TTCTCGGACC TGGGCATCGG CGCCTCGATC GTGCAGCACC GGCGGTCCGA CGCGGCGTTC
CTGAACACCG CCTGGACGGT ACAGGTGGCG CGCGGGTTCC TGCTCTGGCT CGCCACCTTC
GCGGTGGCGT GGCCCGCCGC CTGGATGTAC GGCGAGCCGC AGCTCATGTG GATGCTGCCC
GTGGCCGGGC TGGCGGCCTG CCTGGACGGC TTCGTCTCCA CCGCGATCGA CACCGCGAAC
CGCGACCTCC GGATGGCGCG GCTCCAGCTG TTCGACCTGG CGGTACAGGT CTCGGCGTCG
GTCATCATGA TCGCCGGCGC CTGGCTCACC CGCAGTGTCT GGGCCCTGCT CGCCGGCACG
ATCGCCGCGA GCGCGATCCG CACGGTGCTC AGCCACGTGG TGATGGGCGG CGTCCGCAAC
CGGTTCTGCT GGGACCGGGA AGCGGCGGCG AGCATGCTGC ACTTCGGCAA GTGGGTGTTC
GTCAGCTCGG CGGTGATGTT CCTGGCGCAG CAGGGCGACC GGCTGGTGTT CGGGAAGGTG
CTCCCGCTCG AGCGCCTCGG CGTCTACAAC ATCGCCCTGG CCCTGGTGGA CGCCCCCACC
GCGCTCATCG CCGCCATCTC GTTCCGGGTC TTCTTCCCCA TGTTCTCGGA GATGCGCCGG
AGCGATCCCG ACCTGGAGGC CGCGTACCGC CGGGCCAACT CGTCCATGGC GCTGCTCGCC
GGCGCGGGCG CGCTGGCGCT GATGCTGGCC GGCCCGCTGG TGGTCCAGGT GCTGTACGAC
GACCGCTACG CCGAGGCGAG CTGGATCGTG CGCCTGCTCG CGCTCGGGAT CTGGGGCAGC
TCGCTCGTGC ACTTCACCGC GTCGGTGGTG CTCGCCGGCG GCCGCGTGAA GTGGCTCGCG
GCGTCGAACG CGGCCCGCCT GGTGTGGCTG CTCGGCGCCG TCCCCCTCGC GTTCCGGCAA
TGGGGGTTCG AGGTCGCGCT CGGCTGCGTC GTCGTGGCGG ATGTGCCACG GTACCTGTTC
CTGGCGCTGG GGTGCCGCAG GGACGGCCTG CACATCCTGG CGGGGGACGC CGGGCGCACG
GTCAAGCTCG CGGTGGCCGC CGGCGCGGGG TTGCTCGTGC TGGAGCTGCT GGGCCCGCGC
AGCGTCCTCG CCGTCGCCGT CGCTTGCGTG GCGGCGCTCG CCGCCTGGCT CGCCATGAAC
CGCGAGCCCG CGCGCTGGTA CGTCGAGAAG ATTCGCGGCG CGCTGGCGGC CCGGCGCGGC
TAG
|
|---|
| Protein sequence | MRNVQPAGAP PPPTPEDETP APALEQLGRR VARGSAWVAV GYGASQVVRF GANLVLTRLL
FPRAFGLMLL VNVCLQGVHL FSDLGIGASI VQHRRSDAAF LNTAWTVQVA RGFLLWLATF
AVAWPAAWMY GEPQLMWMLP VAGLAACLDG FVSTAIDTAN RDLRMARLQL FDLAVQVSAS
VIMIAGAWLT RSVWALLAGT IAASAIRTVL SHVVMGGVRN RFCWDREAAA SMLHFGKWVF
VSSAVMFLAQ QGDRLVFGKV LPLERLGVYN IALALVDAPT ALIAAISFRV FFPMFSEMRR
SDPDLEAAYR RANSSMALLA GAGALALMLA GPLVVQVLYD DRYAEASWIV RLLALGIWGS
SLVHFTASVV LAGGRVKWLA ASNAARLVWL LGAVPLAFRQ WGFEVALGCV VVADVPRYLF
LALGCRRDGL HILAGDAGRT VKLAVAAGAG LLVLELLGPR SVLAVAVACV AALAAWLAMN
REPARWYVEK IRGALAARRG
|
|---|
| |