| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4112 |
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| Symbol | |
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| ID | 5375867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | + |
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| Start bp | 4813061 |
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| End bp | 4814488 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640845639 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001381274 |
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| Protein GI | 153006949 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0569417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.70115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCG CTCCCGAGAG CACCCGTGAC GTCGCCTTCG CCGCCGTGAA CGCCGCGTTC
GGCTCGCTCG GCCGCATCTG CATGGCGCTC GACTCCCAGT TCCGGATCCG CCACGCCTCG
GAGCGCATGG AGTCGCTGCT CGGCGCGGGG GCCGCGGGGC GCATCGCGGG CGCGCCCGTC
GAGACGGTGC TCGGGACGGA GCTGTTCGGG ACGGACGGGC CGCTCCGCCA GGCGCTCCTC
GCGGGAGAGC GGCGGGAGGG CTGGCGCGCC TACCTCCAGT GCGAGCGCGG CCCGCGCCTG
CTCTCGGTCA CGGCCGCCCC CCTCGAGCAC GATCCTCACG GCGTCTGCGA TCCCTCCGCC
GCCTACCTGG TCGTCCTCCG CCCCGCGGAC GACGAGTCCC CGGACGTCTG CGCGCCCGTC
GCCGGGTTCG GCGTCATGTG CCGCTCGCAG GCGATGACGC GGGTGTTCCG GCTCATCGAG
ACCCTGCAGC ACAGCGAGTC GACCGTGCTC GTCACCGGCG AGAGCGGGAC CGGCAAGGAG
GTGATGGCGC GCATCATCCA CGCGCACTCG CCGCGCCGGA ACGGCCCGTT CGTCGCCGTG
AACGCGGCGG CGCTGCCCGC CGAGCTGCTC GAGAGCGAGC TCTTCGGCCA CGTGCGCGGC
GCGTTCACGG GCGCCATCCG CGACCGCCTC GGCCGCTTCG AGGCGGCCGA GGGCGGGACG
CTCTTCCTCG ACGAGGTGGG CGACCTGCCC TTGCCGGTGC AGGTGAAGCT GCTGCGCGTC
CTCCAGGAGC ACACCTACGA GCGCGTCGGC GACGACGCCG AGCGGCGCAC CAGCGCGCGC
ATCATCGCCG CCACGCACCG CGATCTGCGC CGGGCCGTCG CGGCCGGGAC CTTCCGCGAG
GACCTCTACT ACCGCCTGCG CGTCTTCCCG GTGGAGCTCC CGCCGCTGCG GGCGCGGCGC
GAGGACATCG AGCCCATCGC GCGGGTCCTC CTCGGGCGCG TGGGCGCGCG AACGGCGCGC
GCGCTCCGCT TCTCGCCCGA CGCGCTCCGC GTCCTCCTGT CCTACGACTG GCCCGGCAAC
GTGCGCGAGC TCGAGAACGC CCTCGAGTAC GCCGCCACGG TGTGCCAGGG GCAGACGCTC
CAGCCCGAGG ACCTCCCGCC GGAGATCGTC GCCGGCGCGC CGCACCGCGA GCCCCTCGCG
GCGCCCCTCG CGGCGGGCTC CTCCACCCCC GCCCAGCTCG CGGCCGCCGC CGCCCGCCGC
GCGAGCCCGC ACGACGAGCG CGCGTCGCTG CAGGCGGCGC TCGACGCGCA CCGCTGGAAC
CGGGCGGACA CCGCCAAGGC GCTGGGCCTG TCGCGCAGCA CGCTCTGGCG GCGGATGCGG
GCGCTCGGGC TGCTCGAGCC GGCGGAGGGC GCGCAGGCGG CGGGCTGA
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| Protein sequence | MQAAPESTRD VAFAAVNAAF GSLGRICMAL DSQFRIRHAS ERMESLLGAG AAGRIAGAPV
ETVLGTELFG TDGPLRQALL AGERREGWRA YLQCERGPRL LSVTAAPLEH DPHGVCDPSA
AYLVVLRPAD DESPDVCAPV AGFGVMCRSQ AMTRVFRLIE TLQHSESTVL VTGESGTGKE
VMARIIHAHS PRRNGPFVAV NAAALPAELL ESELFGHVRG AFTGAIRDRL GRFEAAEGGT
LFLDEVGDLP LPVQVKLLRV LQEHTYERVG DDAERRTSAR IIAATHRDLR RAVAAGTFRE
DLYYRLRVFP VELPPLRARR EDIEPIARVL LGRVGARTAR ALRFSPDALR VLLSYDWPGN
VRELENALEY AATVCQGQTL QPEDLPPEIV AGAPHREPLA APLAAGSSTP AQLAAAAARR
ASPHDERASL QAALDAHRWN RADTAKALGL SRSTLWRRMR ALGLLEPAEG AQAAG
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