| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4082 |
|---|
| Symbol | |
|---|
| ID | 5378143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 4775335 |
|---|
| End bp | 4776387 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640845609 |
|---|
| Product | isopentenyl pyrophosphate isomerase |
|---|
| Protein accession | YP_001381244 |
|---|
| Protein GI | 153006919 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.242984 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCG CCGAGCGGAA GGACAGTCAC CTCGCCCTGT GCCTCGAGGA GCAGGTCGAG
CTCCCGGGCG GCGACGCGAC CGGGTTCGGC GCCCTGCGCT TCGATCACGA CGCGCTGCCC
GAGGTGGACC TCGCGGCGGT GCGGACCGAG ACGGAGCTCC TCGGGAAGAA GCTCGCGGCG
CCCATCGTGG TCGGCGCGAT GACGGGAGGG ACGGCGCGGG CGGGCGAGAT GAACCGGCGC
CTCGCGCGCG CCGCGGAGCG CTGCGGCGTC GCGTTCGCGC TCGGGTCGCA GCGGCGCATG
CTCCAGGATC CGGCCAGCCG CGACAGCTAC GCGGTGCGCG CCGCCGCGCC GGAGCTCCGG
CTCCTCTTCG GAAACCTGGG CGCGGTGCAG CTCAACTACG GCGTGGGCGT GGCGGAGCTG
CGGGCGCTGG TGCGGGACGT CGGCGCCGAC GCGTTCAACT TCCACCTGAA CCCGCTGCAG
GAGGCGATCC AGCCCGAGGG GGACACGCGC TTCGCGGCGC TCCTGCCGAA GCTGGCCGCC
GTGATCCCGG AGCTCGGCGT GCCCGTGCTG CTGAAGGAGA TCGGCGCGGG GATCTCCCGC
ACCACCGCGC GGAAGATCGC GGCGCTGCCC GTGGCGGGGG TGGAGACCGG CGGGCTCGGC
GGCACCTCCT GGGCCAAGGT CGAGAGCCTG CGCGCGGCCG ATCCGGCGCG GAAGAGCCTC
GGCGAGGCCT TCGCGCGCTG GGGGATCCCG ACGGTGGAGA GCATCGCCGC CTGCCGGCAG
GCGCTCCCGG ATCGGGTGGT CGTCGCGTCC GGCGGGATCC GCAACGGGAT CGAGATCGCC
AAGGCGCTCG CGCTCGGGGC GGACGCGGTG GCGCTCGCGC TGCCGCTGCT GAAGGCCGCG
GAGCAGTCCT GGGAGGCGGC GGCCGAGGAG CTCGATCGGC TCGTCCAGGA GCTGCGGCTC
GCCATGTTCC TCACCGGCTG CGCGCGCGTC TCCGAGCTGC GCGCCCGCCC GCTCTCCCAC
GCTCGCGATC TCACGGCGGC GCCCCGGACA TGA
|
|---|
| Protein sequence | MSIAERKDSH LALCLEEQVE LPGGDATGFG ALRFDHDALP EVDLAAVRTE TELLGKKLAA
PIVVGAMTGG TARAGEMNRR LARAAERCGV AFALGSQRRM LQDPASRDSY AVRAAAPELR
LLFGNLGAVQ LNYGVGVAEL RALVRDVGAD AFNFHLNPLQ EAIQPEGDTR FAALLPKLAA
VIPELGVPVL LKEIGAGISR TTARKIAALP VAGVETGGLG GTSWAKVESL RAADPARKSL
GEAFARWGIP TVESIAACRQ ALPDRVVVAS GGIRNGIEIA KALALGADAV ALALPLLKAA
EQSWEAAAEE LDRLVQELRL AMFLTGCARV SELRARPLSH ARDLTAAPRT
|
|---|
| |