Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_4038 |
Symbol | ligC |
ID | 5375443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 4728522 |
End bp | 4729619 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640845565 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_001381200 |
Protein GI | 153006875 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCTACC CGATCGCGCC CCCCGTGGAG CCCATGCTGG CCAAGCTCTC GGAGGCCTTG CCGGAGGGTG ACGGGTGGCT GTTCGAGCCG AAGTGGGACG GCTTCCGCGC GCTGGTGTTC CGCGACGGCC CGGAGCTCTT CCTCCAGTCG CGCGAGCTCA AGCCGCTGAA CCGCTACTTC CCCGAGCTCG AGCAGCCGCT CCTCGCGAGC CTCCCCGAGC GCTGCGTGCT GGACGGCGAG ATCGTCATCG CCGGGGAGTC CGGCCTCGAC TTCGAGGCGC TCCTCCTCCG CATCCACCCC GCGGCGTCGC GGGTGAGGCT GCTCGCGCAG GAGAGCCCGG CGAGCATCGT GCTGTTCGAC CTGCTCGCCC TCGGCGACCG CGACCTGCGC TCCTCGCCGC TCGCGGAGCG GCGCGCGCAG CTCGAGGGGC GACTGGCGCG CGCGGCGACG CAGGTCCACG TGACGCCGGC GACGACGGAC CGGGCCGTGG CGCAGGACTG GTTCTCGCGC TTCGAGGGCG CGGGGCTCGA CGGCGTCGTC GCGAAGCGGC TCGACTCGAC CTACCAGCCC GGCGTGCGCG CCATGGTGAA GGTGAAGCAC GCGCGCACGG CCGACTGCGC CGTGGCCGGC TTCCGCTGGC ACAAGAACGG CCCCGGCACG ATGGTGGGCT CCCTCCTGCT CGGGCTCTAC GACGACGGCG GCAAGCTCCA CCACGTCGGC ATCTGCAGCG CCTTCTCGGT CGCTCGCCGC AAGGAGCTCG TGAAGGAGCT GGCGCCGCTG CGCGAGAACG CGAAGGACCA CCCCTGGCGC GACTGGGCGG AGTGGGCCGA CGCGGACCGC GAGCCCGCGC AGCGCATGCC CGGCGCGAGC AGCCGCTGGA ACCGCGGCAA GGACCTCTCC TGGGAGCCGC TGCGGGTGGA GCGCGTCTGC GAGGTCGCCT ACGACCACCT GCAGGGCGAC CGCTTCCGCC ACGCCACCCA CTTCCTGCGG TGGCGGCCGG ACAGATCGCC GAGCGAGTGC CGCTACGACC AGCTCGAGGT GACGCCGGCG TACGAGCTCT CGCGCATCTT CGGGGTGCGC TCGCGGGCGT CGCGCTAA
|
Protein sequence | MPYPIAPPVE PMLAKLSEAL PEGDGWLFEP KWDGFRALVF RDGPELFLQS RELKPLNRYF PELEQPLLAS LPERCVLDGE IVIAGESGLD FEALLLRIHP AASRVRLLAQ ESPASIVLFD LLALGDRDLR SSPLAERRAQ LEGRLARAAT QVHVTPATTD RAVAQDWFSR FEGAGLDGVV AKRLDSTYQP GVRAMVKVKH ARTADCAVAG FRWHKNGPGT MVGSLLLGLY DDGGKLHHVG ICSAFSVARR KELVKELAPL RENAKDHPWR DWAEWADADR EPAQRMPGAS SRWNRGKDLS WEPLRVERVC EVAYDHLQGD RFRHATHFLR WRPDRSPSEC RYDQLEVTPA YELSRIFGVR SRASR
|
| |