Gene Anae109_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3980 
Symbol 
ID5376727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4640494 
End bp4641591 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content69% 
IMG OID640845507 
Productphage integrase family protein 
Protein accessionYP_001381142 
Protein GI153006817 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.356268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCT ACCAGTACGA GAAGGACGGC CGGACCCTGT TCGGCCTCGA TGCATGGATA 
AAGCTGCCCA GCGGGCAGCT GAAGCGGGTC CGGGTGAAGA AGATCCCGAG CCAGAAGCAC
GCGAAGATGC TCCTCGCCAA GCTCGAGATC GACGCGTTCG AGGGCCGCTG GTTCGACCGG
CAGCTCGAGG CGAAGACGAC GGTCGAGGAC TGCTGGAAGG CGTGGGAGCC GATCACCCGG
CGCGACAACG ACAGCTGGCG GTCCGACGTC GATCGGGCGC GCCACCTCGT CGAGCACCTC
GGCAGCCGGC GCGCCGCGAA GCTCACGCGC AAGGACGTCG AGGAGTACCG GGAGAAGCGC
TTCGAGGAGA CCACCCGCCG CGGTGGCCCT CCCGCGCCCG GCACCATCGA CCGCGAGATC
GCGCTGCTCA AGCGCTGCAT CAACTTCGCG ATCGAGTGCG GGACGCTCGT GCGGAACCCC
ATCGCCGCGG TGCCGCTCCT CAACGAGCCG AACACCCGCG ACATGGTGCT GAAGCCGGTC
ATGCTCGAGC GGATCCTGAA GGCGGCGCCG CCCACCTTCG CGCCGGTGAT CGAGTTCGAC
TACGAGACCG GGCTCCGCAA GACCGAGCTC CGCTTCCTGC GCTGGGAGCA GGTGGACCTC
GGGCTCGGGT GCATCCGCCT CTCGGCGAAG GAGACGAAGA CGAACGAGGC GCGCGTCGTC
TACCTCACGA GCCGCGCGCT CGAGATCCTC CGCGCGACCC CGCGCCAGCT CCACTCGCCG
TACGTATTCG TGAACCCGGA CACCGGCCGG CCCTGGAGCG AGCACAACAA GATGCTCCGC
CGCGCCTGCG AGCGCGCCGG CTACGCGGGC ATCTGGTTCC ACGACCTCCG CCGTTCGTTC
GTCACGAACG CGCGCCGGAG CGGCGTGCCG GAATCGGTCG TGATGAAGCT CTCGGGCCAC
AAGACCCGGA GCGTCTTCGA CCGCTACAAC ATCATCGACG AGGGGGACCT CAAGGCCGCG
GTGGAGCGCA TCGACGCGGC GCGCCGGGAG GGTGCCGCCC CCACCTTTCG AGGCGAATTT
TCCACCCGGA CGGACTAG
 
Protein sequence
MGVYQYEKDG RTLFGLDAWI KLPSGQLKRV RVKKIPSQKH AKMLLAKLEI DAFEGRWFDR 
QLEAKTTVED CWKAWEPITR RDNDSWRSDV DRARHLVEHL GSRRAAKLTR KDVEEYREKR
FEETTRRGGP PAPGTIDREI ALLKRCINFA IECGTLVRNP IAAVPLLNEP NTRDMVLKPV
MLERILKAAP PTFAPVIEFD YETGLRKTEL RFLRWEQVDL GLGCIRLSAK ETKTNEARVV
YLTSRALEIL RATPRQLHSP YVFVNPDTGR PWSEHNKMLR RACERAGYAG IWFHDLRRSF
VTNARRSGVP ESVVMKLSGH KTRSVFDRYN IIDEGDLKAA VERIDAARRE GAAPTFRGEF
STRTD