Gene Anae109_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3970 
Symbol 
ID5376013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4631024 
End bp4631428 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content69% 
IMG OID640845494 
ProductTadE family protein 
Protein accessionYP_001381132 
Protein GI153006807 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.043722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.677829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCTC GCGAGTCCAT GGTGAGGCAC GCACGAGGCG CGGCCGCGGT CGAGTTCGCG 
CTCGTGCTCC CCGTGCTGAT GCTCCTTTGC CTCGGCGCGA TCGAGTGGGG GTTCCACTTC
TTCCAGCGCG AGATCATCGT GAACGCCGCC CGCGAGGGGG CACGCGCGGG GAGCATCGCC
GACGCGGACG CGGAGACGGT CGCCGAGGAT CGCGCGCTCG CGTATCTCGG GGTGGCAGGT
CTCGATGGGA CCACCTGCGA CGTGGCCCCG ACGCTCACGA ACACCGGGTC GCCGCCCACG
CCTGCGATTC GCGTGTCGAT CGACTGCACC GGCGGCTCTT TCACGCTTCT CTTCAAAGAT
TTCATGCCGG AGCGGATCGT CGCGACGGCC GAGATGCGCC GCTGA
 
Protein sequence
MIARESMVRH ARGAAAVEFA LVLPVLMLLC LGAIEWGFHF FQREIIVNAA REGARAGSIA 
DADAETVAED RALAYLGVAG LDGTTCDVAP TLTNTGSPPT PAIRVSIDCT GGSFTLLFKD
FMPERIVATA EMRR