Gene Anae109_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3944 
Symbol 
ID5376630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4603364 
End bp4604530 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content74% 
IMG OID640845468 
Productaminotransferase class I and II 
Protein accessionYP_001381106 
Protein GI153006781 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID[TIGR03537] succinyldiaminopimelate transaminase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.082916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGTCGG TCCTCGTGAA GAACGCCCCG AAGAACCCCG CCCTCGGCGC CGTCCGCAAG 
AACCTGATGG TCGAGCTGGA CGAGCGGCGC CGCGCCCTCG TCCGGGCCGG GAAGCGCCTG
TTCGACTTCG GCCTCGGCGA TCCCAGGGAG CCGACGCCCC CCTTCCTGCG CGAGGCGCTC
CGCGCCGCCG TGCCCGAGGT GTCGCAGTAC CCGAGCGCGT TCGGGACGCC CGCGCTCCGG
CGCGCGGTGG CCGGGTACCT CGCGCGCCGC TTCGGCGTGA CGGTGGATCC CGAGGCGCAG
GTGCTCGCCT GCGCCGGCGC GAAGGAGGCC ATCTTCCACC TGCCCCTCGC GTTCGCGGGC
GATCCTGCGC GCCGCATGGT GGTGATGCCC GACCCGGGTT ACCCGACCTA CGAGGTGGGC
GCGCGCTTCG CGGGGCTCGA GCCGGTGATG GTCCCGCTCA CCGCCGCCCG CCGCTTCCTG
CTCGAGCCCG AGGACGTCGG CGAGGCGGTG CTGCGCGAGA CCTCGATCTT CTGGATCTCG
TACCCGCACA ACCCGACCGG CGCGGTCGCC CCGCGCGACT ACCTGCGCCG GGTGGGGGAG
GCCGCGCGCC GCCACGGGTT CGTGGTCGCC TCCGACGAGT GCTACGCCGA CGTCTACTTC
GGCGCGCCGC CGCCCTCGAT GCTCGAGGAG CAGGTGGAGA ACGTCGTCGC CGTCCACTCC
TGCTCGAAGC GGAGCGGCAT GACCGGCTAT CGCTCCGGCT TCCTCGCCGG CGACCCGGAC
CTCGTCGCGG TGCTGCGCTC GCTGCGGAGC CACCCCGGCG TGGCCTCGCC GGAGTTCGTG
GCGGCGGCGG CGACCGCGGC GTGGTCCGAC GACGCGCACC CGGCGGAGCG GCGGGAGATC
TTCCGCCGGA AGCGGGATCG CTTCCTCGCG TTCTTCGCCG AGCACGGGCT GCAGGCGGAC
GCGTCCGAGG CGACGCTCTA CCTGTGGGTG CGGGTGCCGG GCGGGCAGAG CGCGGCGTCC
TACGCGCTGC GGCTGCTGGA CGAGGGGATC GTGGTCGCGC CGGGGACGGC GTTCGGCGCG
GGTGAGGGGT ACGTGCGCGT GGCGCTCGTG CCCACGCTGG CGGAGTGCGA GGAGGCCATC
GAGGCCTGGC GAAGGGTGAG GGAATGA
 
Protein sequence
MSSVLVKNAP KNPALGAVRK NLMVELDERR RALVRAGKRL FDFGLGDPRE PTPPFLREAL 
RAAVPEVSQY PSAFGTPALR RAVAGYLARR FGVTVDPEAQ VLACAGAKEA IFHLPLAFAG
DPARRMVVMP DPGYPTYEVG ARFAGLEPVM VPLTAARRFL LEPEDVGEAV LRETSIFWIS
YPHNPTGAVA PRDYLRRVGE AARRHGFVVA SDECYADVYF GAPPPSMLEE QVENVVAVHS
CSKRSGMTGY RSGFLAGDPD LVAVLRSLRS HPGVASPEFV AAAATAAWSD DAHPAERREI
FRRKRDRFLA FFAEHGLQAD ASEATLYLWV RVPGGQSAAS YALRLLDEGI VVAPGTAFGA
GEGYVRVALV PTLAECEEAI EAWRRVRE