Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3880 |
Symbol | |
ID | 5375806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 4526362 |
End bp | 4527744 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640845405 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
Protein accession | YP_001381043 |
Protein GI | 153006718 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.769171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC CCCGCTTCTC CCCCGACGAG CTGGCCGCCG CGACCGGCGG ACGCTGGATG GGCGCGCCGC CCGCAGAGCT CGCCGGCGTC TCGACCGACA CCCGCACGAT CGTGCCCGGC GCGCTCTTCG TCGCGCTCCG CGGCGAGCGC TTCGACGGCC ACGCCTACCT CGGCGAGGCC TCCGCGAAGG GCGCGGCCGC CGCCGTCGTC GCCCACGGCG CCGCCGCGGG GGCCCCGCTG CCGGTCCTCG CCGTCCCCGA CACGCTCGCG GCGCTCGGCG CGATCGCGCG CCACCACCGG CGCCGGTTCC ACATCCCGGT CGTGGGGGTC ACCGGCTCGA ACGGCAAGAC CACCACCCGC GAGATGATCG CGGGGATCCT CGCCACGCGC GGGCCGGTCC TCAAGACCGA GGGCAACCTC AACAACGAGG TGGGCGTCCC GCTCACGCTC CTCGGGCTCG GGCCGGAGCA CCGCTCGGCC GTGATCGAGA TGGGGATGAA CCATCCGGGC GAGATCGCCC GGCTCGCCGC CATCGCCGAG CCGTACGTCG GGGTCGTGAC GCTCGCCGCC GCCGCGCACC TCGAGGGGCT CGGCACGGTG GACGCGGTGG CGGACGCCAA GGCCGAGCTG TACCAGGGGC TCCAGGACAC CGGCATCGTG GTCGCCAACG CGGACGACCC GCGCATGCTG AAGCGGGCGC AGGCCGCCGG CAAGCGCATG CTGACCTTCG CGGCGGGCGC GGGTCGGCGC GGCGACGTGG TCGTGCTCGA GATCGGCTCG CAGGGCGACG ACGGCCTCCA CTTCGTGCTC GGCGTCGGCA ACCGCGAGGT CCCCGTGCAC ATCCCCGGGC TGGTGGGCGC GCACAACGCC GTGAACGCGG CGGCGGCCGC CGCGGCGGCG ATCTCGCTCG GCTGCAGCGA CCGCGAGATC GCGCAGGGGC TCGCGGCGGT CCGTCCGGTC GGGCGGCGCC TGCGGCTCGA GCGGCTCGCC TCCGGGCTGC GCCTCGTGGA CGACTGCTAC AACGCGAACC CGGCGTCGAT GTCGGCCGCG CTCCGCACGC TCGTGGACCT CGCGCGGCCC GACGCCCGGG CGGTGGCGGT CCTCGGGGAC ATGCTGGAGC TCGGCGCCTT CGAGGAGCCG GCGCACCGCG AGCTCGGCGG CGAGGCCGCC CGCGCGGGCG TGAGGCTCCT CGCCGCCTTC GGCCCGCGTT CCCGCGCCAC CGCCGAGGCG GCGCGCGCCG CAGGCCTCGA GACCTTCCAC ACCGACGACA TGGACGCGCT CGTCCGCTGG GCCCGGACCG CGCTCGCGCC GCCGTCGGAC GTCCTCCTCG TCAAGGGCAG CCGCGGCATG AAGCTCGAGC GGCTGGTCGA GGCCCTCCGC TAG
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Protein sequence | MTVPRFSPDE LAAATGGRWM GAPPAELAGV STDTRTIVPG ALFVALRGER FDGHAYLGEA SAKGAAAAVV AHGAAAGAPL PVLAVPDTLA ALGAIARHHR RRFHIPVVGV TGSNGKTTTR EMIAGILATR GPVLKTEGNL NNEVGVPLTL LGLGPEHRSA VIEMGMNHPG EIARLAAIAE PYVGVVTLAA AAHLEGLGTV DAVADAKAEL YQGLQDTGIV VANADDPRML KRAQAAGKRM LTFAAGAGRR GDVVVLEIGS QGDDGLHFVL GVGNREVPVH IPGLVGAHNA VNAAAAAAAA ISLGCSDREI AQGLAAVRPV GRRLRLERLA SGLRLVDDCY NANPASMSAA LRTLVDLARP DARAVAVLGD MLELGAFEEP AHRELGGEAA RAGVRLLAAF GPRSRATAEA ARAAGLETFH TDDMDALVRW ARTALAPPSD VLLVKGSRGM KLERLVEALR
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