Gene Anae109_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3421 
Symbol 
ID5377097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4022734 
End bp4023348 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID640844940 
ProductATP-dependent Clp protease, proteolytic subunit ClpP 
Protein accessionYP_001380589 
Protein GI153006264 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.461069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.155928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTACA TCCCGATGCC CTACGTCGTC GAGCAGACGC ACCGCGGTGA GCGGAGCTAC 
GACATCTACT CGCGCCTGCT CAAGGATCGG ATCGTCTTCC TCGGGACCCC GATCGACGAC
GACGTCGCGA ACGTGGTGAT CGCGCAGCTG CTGTTCCTCG AGTCCGAGGA CCCGGACAAG
GACATCAGCC TCTACATCAA CAGCCCGGGC GGTTCGGTGA CCTCCGGCCT CGCGATCTAC
GACACCATGC AGTACGTGAA GCCGCAGGTG TCCACCATCT GCCTCGGCCA GGCGGCCAGC
ATGGGCGCGT TCCTCCTGGC CGGGGGCGCG GCGGGCAAGC GGTTCGCCGT CCCGAACGCG
CGCATCATGA TCCACCAGCC GATGGGCGGG TTCCAGGGAC AGGCCACCGA CATCGACATC
CAGGCCCGCG AGATCCTTCG GCTCAAGGCG AAGCTGAACG ACATCCTCGC GAAGCACACG
AAGCAGCCGC TGGAGCGGAT CGAGAAGGAC ACCGATCGCG ACTACTTCAT GGGGGCCGGC
GAGGCCAAGG AGTACGGCCT CATCGACGAA GTGATCGTGC ACAAGCCGAA GGCGACGGAG
AAGAAGGCGC AGTAA
 
Protein sequence
MPYIPMPYVV EQTHRGERSY DIYSRLLKDR IVFLGTPIDD DVANVVIAQL LFLESEDPDK 
DISLYINSPG GSVTSGLAIY DTMQYVKPQV STICLGQAAS MGAFLLAGGA AGKRFAVPNA
RIMIHQPMGG FQGQATDIDI QAREILRLKA KLNDILAKHT KQPLERIEKD TDRDYFMGAG
EAKEYGLIDE VIVHKPKATE KKAQ