| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3359 |
|---|
| Symbol | |
|---|
| ID | 5374344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 3925845 |
|---|
| End bp | 3927869 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640844873 |
|---|
| Product | NifA subfamily transcriptional regulator |
|---|
| Protein accession | YP_001380527 |
|---|
| Protein GI | 153006202 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG TAGCTACCCG GTATGACGAG CGCGGCATCA CCATGGACAC CCCTCCCTCT
CTACGGACGC CCGGGCAGCA GGCGATGACG GACGAGGGCT GGCACCAGCT CTTCGAGCAC
TCGGCCATCG GGGTGACGCT CGCCGATCTC GAAGGGCACC TCGTCCACGT GAACCGCGCC
TACTGCGCGA TGCTCGGCTA CACGGAGGTC GAGCTCGAGG GGCACTCGTA CGTCTCCCAT
GCACACCCGG ATGATCGCGC GCGCCACCTG ATTCTCGTTC GCGAGCTGCT CGCCGATGCC
CGCGCCCATT TCCAGGTCGA GGAGCGGTAC GTCCGCAAGG GCGGCTCGGT GATGTGGGTC
AGCAACAGCG TGTCGCTGGT GCCGCCCCGG GGCGGCTCGC GCCGGATCCT CATCCTCGGG
CTCGTCGAGG ACATCACCGA GCGCATGCGC CTCCGTGACG AGCTGGACGC CGAGCGGAAC
CGGCTACGCC TTCTGCTCGA CGTCAACGAG CTCCTGGTCG CGCACCTCGA CCTTCGGGAG
ATGTTCCAGG CGCTCGCGTC GAGCCTGCGG AGGGTCACGG ATTGCCACTT CATCGGTCTC
GCCCTGCCCG ACGCCGCGAC GGGCGAGCTG CGGCAGCACA TCGTCGACCA TCCGGACGGG
AAGGGTGCCA TCACCGAGGG CATGGTGCTG CCTCTTCACG GCTCCGCCTC CGGCAAGGCG
TTTCGCACGG GCGCGCCCGT CTTGTTGAAC GACCCGGAGG CGAACCGCCA GGACCCGGAC
CTGTATGGCA CTCCCGAGGG AGCGCGGTTC TATCGGACCG TGCTCGAGGA AGGAGTTCCT
TCGGGATACG TCCTGCCGCT CGTTCACCGT GGCGAGGTGC TGGGCGTCCT CCAGCTCAAG
AAGTACGCGG ACGCTCGATT CAAGGAACGA GAGATCGAGT TCATGTCCAA GGTGGCGGGC
CAGCTCTCGA TCGCGGTGGC GAACGCCCTC GAGTACCGCG AGGTCAAGGA GTCGAAGGAG
CGGCTGGACA GGGAGCGGGT CTACCTGAAG GAGGAGATCC GGTCTGCGCA CGACTTCGAG
GAGATCATCG GGGTGAGCCG CACGCTGAAG CAGGTGCTCG GCCAGATCGA CACGGTCGCG
GTCACGGACT CGACCGTCCT CATCCTGGGG GAGACCGGCA CGGGCAAGGA GCTGATCGCG
CGCGCCATTC ACAACCGCAG CCGGCGGCGT GACCGTCCAT TCGTGAAGGT CAACTGCTCC
GCGATCCCCA CCGGGCTCCT CGAGAGCGAG CTCTTCGGCC ACGAGCGCGG CGCCTTCACC
GGGGCCACCG CGCCCAGGAT CGGACGCTTC GAGGCGGCCG ACCAGGGGAC GCTGTTCCTC
GACGAGATCG GGGACCTCCC CGTGGACCTG CAGCCCAAGC TGCTCCGGGT CCTCCAGGAG
CGCGAGTTCG AGCGGTTGGG CGCCAGCCGC ACGCGACGGG TCGACGTCCG GGTCGTCGCG
GCGACGAACC GGGGACTCGC CACGATGGTC GGGGAGGGCA GGTTCCGGGA GGATCTGTAC
TACCGGCTGA ATGTCTTCCC CATCACGCTT CCACCGCTGC GGGAGCGCGC CGGGGACATC
CCGCTCCTCG TGCGGCACTT CGTCGGCGTC TACGCCCGGC GGATGGGCAA GCAGATCGAC
CACATCCCCG ACGCGTCCAT GCGCGCGCTG GTCGGCTATC ACTGGCCGGG CAACGTACGC
GAGCTGCAGA ACGTGATCGA GCGGGCGGTG ATCCTCACCC CCGGTGCGGT CCTCGAGCTG
GCGCTCGCCG AAAGGGCCGC CGGCGCCCGG GAAGATCGAC CGGACGCCGC GGCACCCAAC
GGCCACCGCA CGCTGCAGGA GGTGGAGCGT GAGCACATCC TGGGCGCGCT CCAGGAGGCC
AAGTGGGTGA TCGGCGGCCC GAACGGCGCG GCCGCGCGTC TCGGCCTACG GCGCACCTCG
CTCATGTACC GGATGGAGAA GCTGGGCATC GCTCGACCGA CGTGA
|
|---|
| Protein sequence | MTEVATRYDE RGITMDTPPS LRTPGQQAMT DEGWHQLFEH SAIGVTLADL EGHLVHVNRA
YCAMLGYTEV ELEGHSYVSH AHPDDRARHL ILVRELLADA RAHFQVEERY VRKGGSVMWV
SNSVSLVPPR GGSRRILILG LVEDITERMR LRDELDAERN RLRLLLDVNE LLVAHLDLRE
MFQALASSLR RVTDCHFIGL ALPDAATGEL RQHIVDHPDG KGAITEGMVL PLHGSASGKA
FRTGAPVLLN DPEANRQDPD LYGTPEGARF YRTVLEEGVP SGYVLPLVHR GEVLGVLQLK
KYADARFKER EIEFMSKVAG QLSIAVANAL EYREVKESKE RLDRERVYLK EEIRSAHDFE
EIIGVSRTLK QVLGQIDTVA VTDSTVLILG ETGTGKELIA RAIHNRSRRR DRPFVKVNCS
AIPTGLLESE LFGHERGAFT GATAPRIGRF EAADQGTLFL DEIGDLPVDL QPKLLRVLQE
REFERLGASR TRRVDVRVVA ATNRGLATMV GEGRFREDLY YRLNVFPITL PPLRERAGDI
PLLVRHFVGV YARRMGKQID HIPDASMRAL VGYHWPGNVR ELQNVIERAV ILTPGAVLEL
ALAERAAGAR EDRPDAAAPN GHRTLQEVER EHILGALQEA KWVIGGPNGA AARLGLRRTS
LMYRMEKLGI ARPT
|
|---|
| |