| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3035 |
|---|
| Symbol | |
|---|
| ID | 5375391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 3534910 |
|---|
| End bp | 3538071 |
|---|
| Gene Length | 3162 bp |
|---|
| Protein Length | 1053 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640844560 |
|---|
| Product | protease domain-containing protein |
|---|
| Protein accession | YP_001380216 |
|---|
| Protein GI | 153005891 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3227] Zinc metalloprotease (elastase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.559762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTC GCTCGTGTCT CGCCCTTGCC GTAAGCGCTG CGCTCGCCGC CTCGCCGGCG
CTCGCCGATC CCCGCGCCCG CGATGTCGCG CTGAAGAGGC TACAGGATGC GGCAAAAGGC
ACCGCCGCCG TGTCGATGCA CAAGTCGACC GACGTGGCGC GGTTCGTGAG CCTGCCGCCG
GCTGCACGCG GGCTCGGCCA GGCCGCGGCA AGGACGGAGC GCGACAAGAA GGCGCAGTCC
GCCGCGTTCT TCCGCAGCTA CGGCGCGGCG ATCGGGGTCT CGGATCCCGC CGGTCTCCGC
CACGTCTCGA CCGTCGTCGA CGCGCTCGGC GAGACCCACC TCACGTACCG GCAGTTCCAC
GACGGCGTCC CGGTCTTCGC GGGAACGGTG AAGACGCACT TCGACGCGGC GCACAAGCTG
AAGGCGGTGA ACGGCACCGC GGTCCCGGAC CTCGCGGTCG TCCCGACGCC GACGTGGAGC
GCCGCGCAGG CGGCAGAGCT CGCGCTCTCC GCGGTCGTCC GTGAGCGGGG CCCCTCGGGC
ACCCTCGGGA TCGGCTCGAC GAAGCTGTAC GTCTATCGCG AGGGGCTGGC GAAGGGCGTC
CCGGGCGAAG CGCAGCTCGC GTGGGAGATC GAGGTGACCG ACGGCGCCGG CGTCCGCGAC
CTCGTCTACG TCGGCGCGCA CACGGGCAAG GTCGTCGAGA CCGTCGCCGG GATCCACGAC
GAGCTGAACC GCCGGGCGTA CGACGGGCAC GAGCTCGCGT TCGCGCCGAG GAGCTACCCG
AACGCCGCCT ACTGGACGGA GGGGCAGGGC TTCCCGACCG CGTCCGAGGA GGCGAACAAC
ATGATCGCCT CGTCGAAGGA GGTCTACGAC TTCTTCAAGA ACGCGTTCGG CCGCGACTCC
TTCGACGGCC AGGGCGCCAC GATGGATGCC ATCTTCGACC GCGGCTACAG CTGCCCGAAC
GCTTCGTGGA ACGGGACGTT CATCTCGTTC TGCCCGGGGA CGACCACCGA CGACGTGACC
GCGCACGAGT GGGGGCACGC GTACACGCAG TACACCCACG ACCTCATCTA CGCGTGGCAG
CCGGGCGCGC TCAACGAGGC GTACTCGGAC ATCTGGGGTG AGATCGTGGA CGCCATCAAC
GGCCGGGGCG GCGACGCGCC GGACGCGGCG CGCAGCGCGG GCGCCTGCTC GACCTTCTCG
CCGCCGGTCG CCAAGCTCGT CGTGACGGCG CCGGCCTCCC TCGCGGGCGA GTACTTCGCG
CAGTCGGCGT CGTTCGGCCC GAGGCTGACC GCGGCGGGGA TCACGGGCGA GGTCGTCGCC
GCGCTCGATC CCGCCGACGC CGGAGGCCCC AGCACCCTCG ATGCGTGCTC GCCTCTCACC
AACGCCGCGG CGGTCCTGGG CAAGATCGCC CTCGTGAACC GCGGCTCGTG CAACTTCACC
GTCAAGGTGA AGAACGCGCA GACCGCCGGG GCGGTCGCGG TGATCGTCGC GAACAACGCG
GCGAATGGCC TCCCCGGGAT GGGCGGGTCG GACGCGTCGG TGACCATCCC GTCCGTCGGC
GTGCAGAAGG CGACGGGCGA CTCCATCCGC GCCGCGCTGG CCGGCGCCGA GGTGGTGACC
GCGAAGCTGG TGGCCCAGCC CGGCAGCGAC GCGTCGGTGC GCTGGCTCAT GGGCGAGGAC
TCGGCGGCGT TCAGCGGCGC CCTCCGGGAC ATGTGGAACC CGACCTGCTA CTCGAACCCG
GGCAAGGTGA CGGACCGGGC GTACTACGTG TGCGACTACG CCGGCGACAA CGGCGGCGTG
CACACCAACT CGGGCGTGCC GAACCACGCG TTCGCCCTGC TGGTCGACGG CGGCTCGTAC
AACGGGCAGA CGATCGCCGG GATCGGGCTC ACCAAGGCCG CGCACCTCTA CTTCCGCGCC
GCGGACGTCT ACCAGGTCGA GGACAGCGAC TTCGCCGACC ACGCGACCGC GCTCGAGTCC
TCCTGCGCCG ACCTCACGGG GGCCACGCTC CCGGCGCTCA CGGGCGGCGC CTCGGGCGAG
ACCATCACCG CCGCCGATTG CGCGGAGGTG GCGAGGACGA TCGCAGCGGT CGAGCTGCGG
ACGCCCCCGA CCTTCTGCGG GTTCAGGCCG CTCCTCAACC CGCAGGAGAC GCCGCAGTGC
GGGGCGGGCA CGAACGGAGC GAAGCAGGCG ATTCAGCTGT TCTCGTTCGA CGCGGGGGCC
TCCGGCTGGA CCTCCGCGAC CTTCGCGGCG GCGCCCGGCG ACTTCACCCC GCGCGAGTGG
ACCTGGCTCG GCGCGCTCCC GAACGGCCGG CCGGGCTCCG CCTTCTTCGC CCCGGATCCC
AACATCGGCA CGTGCGCACC GGGCGGGGAC GAGACCGGGG TGCTCTCGCT GACGAGCCCC
GCCATCACGC TCCCGGGCAC CACCGAGTTC GCCCGCGCCA CGTTCTGGCA CTGGGTCGCC
ACGGAGGCGG GGTTCGACGG CGGGAACGTC AAGGTGAGCG TCAACGGTGG GCCGTGGCAG
CTCCTCCCGC CGTCGGCGTT CACGTACAAC GGGTACAACG CGCTCCTCGA GACGGCCGCC
GCCGGCAACA CGAACCCGCT CGCCGGTCAG CCGGCCTGGA CCGGCACGGA CGCCGGTACC
CTCAAGAGCG GGACCTGGGG ACGGTCGCAC GTGGATCTCG GCACGTTCGC GAAGGCCGGG
GACCGGATCC AGCTGCGCTT CGACCTGGGC ACCGACGGCT GCGGTGGCCG CGGAGGGTGG
TACGTCGACG ACGTCGAGGT GTTCAGCTGC ACGCCGAACG CGGCGACGGT GGCGGTCGAG
GACGCGGCGT ATCCAGAAGG CGACGCGGGC GTCGCGACGA GGGGCGTCAC CGTCCGGCTC
TCCGCGGCGA CGGTCCAGCC GGTGGCGGTC CGCTACGTGG TCGTCGACGG AACCGCCCAG
CACGGGAACG ACTTCGAGGT CGCTGCCACC TCCGGCACGA TCGTCGTCCC GGCGGGCAGG
ACGGCCGCGA GCATCGCCAT CGGCCTCAAG GGCGACATCG TGCCCGAGGG CGACGAGGCG
TTCCTGGTGA GGATCACCGG CGTCACCGGC GCCACGCTCG CCGACGGCGA GGCGGTGGTG
ACGATCCTCG AGGATGACGG AGCGCCTCCG GGGCAGAACT GA
|
|---|
| Protein sequence | MQVRSCLALA VSAALAASPA LADPRARDVA LKRLQDAAKG TAAVSMHKST DVARFVSLPP
AARGLGQAAA RTERDKKAQS AAFFRSYGAA IGVSDPAGLR HVSTVVDALG ETHLTYRQFH
DGVPVFAGTV KTHFDAAHKL KAVNGTAVPD LAVVPTPTWS AAQAAELALS AVVRERGPSG
TLGIGSTKLY VYREGLAKGV PGEAQLAWEI EVTDGAGVRD LVYVGAHTGK VVETVAGIHD
ELNRRAYDGH ELAFAPRSYP NAAYWTEGQG FPTASEEANN MIASSKEVYD FFKNAFGRDS
FDGQGATMDA IFDRGYSCPN ASWNGTFISF CPGTTTDDVT AHEWGHAYTQ YTHDLIYAWQ
PGALNEAYSD IWGEIVDAIN GRGGDAPDAA RSAGACSTFS PPVAKLVVTA PASLAGEYFA
QSASFGPRLT AAGITGEVVA ALDPADAGGP STLDACSPLT NAAAVLGKIA LVNRGSCNFT
VKVKNAQTAG AVAVIVANNA ANGLPGMGGS DASVTIPSVG VQKATGDSIR AALAGAEVVT
AKLVAQPGSD ASVRWLMGED SAAFSGALRD MWNPTCYSNP GKVTDRAYYV CDYAGDNGGV
HTNSGVPNHA FALLVDGGSY NGQTIAGIGL TKAAHLYFRA ADVYQVEDSD FADHATALES
SCADLTGATL PALTGGASGE TITAADCAEV ARTIAAVELR TPPTFCGFRP LLNPQETPQC
GAGTNGAKQA IQLFSFDAGA SGWTSATFAA APGDFTPREW TWLGALPNGR PGSAFFAPDP
NIGTCAPGGD ETGVLSLTSP AITLPGTTEF ARATFWHWVA TEAGFDGGNV KVSVNGGPWQ
LLPPSAFTYN GYNALLETAA AGNTNPLAGQ PAWTGTDAGT LKSGTWGRSH VDLGTFAKAG
DRIQLRFDLG TDGCGGRGGW YVDDVEVFSC TPNAATVAVE DAAYPEGDAG VATRGVTVRL
SAATVQPVAV RYVVVDGTAQ HGNDFEVAAT SGTIVVPAGR TAASIAIGLK GDIVPEGDEA
FLVRITGVTG ATLADGEAVV TILEDDGAPP GQN
|
|---|
| |