| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2878 |
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| Symbol | |
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| ID | 5374202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | + |
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| Start bp | 3326944 |
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| End bp | 3328890 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640844406 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001380062 |
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| Protein GI | 153005737 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.866934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG ACGCGGACCG CCGCCCGATC GTGTGGGCCT TCAGCACGAG CCGGCTGCGG
CACGTCTTCG AGAGCGTCGC GCCGCTCCTC GCCGACGTCG CCGAGGTGCG GGTCTTCGAC
AAGGGCTTCG AGGAGGCGCT CCAGGTGTCG CGCGCGCTCG TCGAGGCCGG CGAGGAGGTG
GACGCGTTCG TCGCCGCCGG CTCGAACGGC GCGTACCTGC GCGATCACGC GAGCGTCCCG
GTGGTGGTGG TGATGGCCTC CACCCTGGAC GCGCTCCAGG CGCTGGTCCA GGCGCGCAAG
CTGTCGAACC GGATCGCGGT GGTGAACTTC CGGCGGGTGG TCGCGGGGCT CGAGCAGGGC
ATCGGGCTCA TGGAGGACAC CACCATCGTG CAGCGACCGT ACGTGACGCC GGAGGACGCG
AAGGCCCACG TGGCCGACCT CGCCGCCCAG GGGTTCGGGG TCGTCGTCGG TCCCGGCCCG
GTGTGCGACC TCGCGGAGCG CGCGGGCCTC CCGTCGGTGC TCCTGTACGG GCAGGACTCC
CTCTCGGAGG CGATCCGCCA CGCCGCGGAG GTGGCGCACA TCGCGCGCGC GGCCGAGGCG
AAGCGGCTGG ACGTCGAGCG CGTCCTCCGC CACCTGGACG TGGGGGTGGT CGCGGTGGAC
GGCGAGGAGC GGATCCAGAC GGTGAACCCC GCGCTGCAAC GGCTGCTCGG CGTCACCGCC
CCGGAGCTCA CCGGACGCCG CCTGTCCGCG GTCGCCCCCG AGCTCTCCCT CGCGCGGGTG
CTCGAGACGG GCACGCCCGA GCTCGACGTG GTGCAGCGGC TCGGCAGCCG GACGCTGGTG
GTCAGCCGGG TGCCGCTGCG CGAGGGGGGA GCGCAGCGCG GCGCCCTGCT CACCTGCCAG
GACGCCGCGG TCATCCAGCG GCTCGAGCGC GGGCTCCGCA CCGAGCACCG CCCTCCCCGC
TTCGTCGCCC GGTTCGACCT CGGCGGCCTC GTCGGCGCGT CCCCGGCGAT CGCCGGCGTG
CGCGCGCTCG CCGAGCGGTA CGCGCGCACC GACGCGACCG TGCTCATCAC CGGCGAGAGC
GGGACCGGCA AGGAGATGGT GGCGCAGGGC ATCCACCGCG CGAGCCGCCG GCGCGACCGG
CCGTTCGTGG CGGTGAACTG CGCGGCGTTC CCGGAGACGC TCCTCGAGGC CGAGCTGTTC
GGCCACGAGG AGGGCGCCTT CACCGGCGCG AGGCGCGGCG GGCGCCCCGG CCTCTTCGAG
GCGGCGCACA CCGGCACCCT GTTCCTCGAC GAGATCGGGG ACGTCCCGAC CACCCTCCAG
ACCCGGCTCC TTCGCGTGCT GCAGGAGCGG CAGGTGCTGC GCCTCGGCAG CAACCACCCC
ACCCCCGTGG ACGTCCGCGT GGTGGCCGCC ACGCACCGCG ACCTGAGGGC GGCCACCGCG
CGCGGCGAGT TCCGCGAGGA CCTGTTCTAC CGGCTGAACA TCCTGCCGCT GCACGTCCCT
CCGCTCCGCG AGCGCGGCGA GGACGTCCAG GCCATCGCCG CCGAGCTCCT GAAGCGCGCG
CTCCTCCGCC ACGGGGAGCC GGACGCGCAC CCGCGCGCGC TCGCGCTCGT CCTGCCGCGG
CTCGCCGGCT ACGCCTGGCC CGGGAACGTC CGCGAGCTCG AGAACGTGCT CGAGCGGGTG
GCGGCGCTGT TCGTCGATCG GGGACCGCGC GCTCGCATCC CGGAGGAGGA GCTGCGCGCC
GCGATCCCCG AGCTCCTCGC CCGGCCGGGC GCGACGCCGG CGGCGCCCGC CGCGCCGCGG
GCGGATCTGC GCGCGGCGCG GCGCGAGCAG GAGCGCGCGC ACGTCGAGCG CGTCCTCGCC
GAGTGTGGCG GGAACCAGGC GGAGGCGGCC CGCCTCCTCG GCATCGGCCG CACGACCCTG
TACAGGAAGC TCGGGCGCGT GCGCTGA
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| Protein sequence | MAIDADRRPI VWAFSTSRLR HVFESVAPLL ADVAEVRVFD KGFEEALQVS RALVEAGEEV
DAFVAAGSNG AYLRDHASVP VVVVMASTLD ALQALVQARK LSNRIAVVNF RRVVAGLEQG
IGLMEDTTIV QRPYVTPEDA KAHVADLAAQ GFGVVVGPGP VCDLAERAGL PSVLLYGQDS
LSEAIRHAAE VAHIARAAEA KRLDVERVLR HLDVGVVAVD GEERIQTVNP ALQRLLGVTA
PELTGRRLSA VAPELSLARV LETGTPELDV VQRLGSRTLV VSRVPLREGG AQRGALLTCQ
DAAVIQRLER GLRTEHRPPR FVARFDLGGL VGASPAIAGV RALAERYART DATVLITGES
GTGKEMVAQG IHRASRRRDR PFVAVNCAAF PETLLEAELF GHEEGAFTGA RRGGRPGLFE
AAHTGTLFLD EIGDVPTTLQ TRLLRVLQER QVLRLGSNHP TPVDVRVVAA THRDLRAATA
RGEFREDLFY RLNILPLHVP PLRERGEDVQ AIAAELLKRA LLRHGEPDAH PRALALVLPR
LAGYAWPGNV RELENVLERV AALFVDRGPR ARIPEEELRA AIPELLARPG ATPAAPAAPR
ADLRAARREQ ERAHVERVLA ECGGNQAEAA RLLGIGRTTL YRKLGRVR
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