Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_2731 |
Symbol | |
ID | 5374612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 3166803 |
End bp | 3168008 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 640844258 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_001379916 |
Protein GI | 153005591 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGGG TCGTCAGCCG CGGCCGCCGC TCTCCGGCCC TGCGCGCCCG TCGCGCTGCG CCCCGCGCCG CCGCGCCCGA CGAGGCCGCC CGCGAGGCGT TCATGCGCGC CGCGGTGCGC GAGGCGACGA AGGGGCTGGG CCGGACGAGC CCCAACCCCG CCGTCGGCGC GGTGCTGGTG AAGGGCGGGC GGGTCGTCGC TCGCGGCCAC CACGCGCGGG CGGGCGGTCC TCACGCCGAG GTGGTCGCGC TGCGCGCCGC GGGCGCCCGC GCGCGCGGCG CAGACCTCTA CACGACGCTC GAGCCCTGCG ACCACTTCGG GCGGACCCCG CCATGCTCCG TGGCGGTGCT CGAGGCGGGC GTCCGCCGCG TGTTCGTCGG CTCCGCCGAT CCCAACCCGC TCGTGAACGG GCGGGGCGTC GCCCGCCTCC GCGAGGGAGG GGTCGAGGTG GTGACCGGCG TGCTGCGGGA GACCTGCGAC GAGCTCAACG CGCACTGGTT CACCTTCATC ACCGAGCGGC GCCCGCACGT GACGCTCAAG GCGGCGGTCA CCCTGGACGG CCGGATCGCG ACGCGCACCG GCGACGCGCG CTGGGTGACG GGCGAGCCGG CGCGCCGCTG GGTGCACCGG CTGCGCGACC GGGTGGACGC GGTGCTCGTG GGCAGCGGCA CCGCCCGCGC GGACGATCCG CGCCTCACCA CCCGGCTCCC CGGCGGGCGC GGGCGCGATC CCATCCGCGT GGTGCTGGAC ACGGATCTCT CGCTCCCGCG GGATCTGAAC CTGTTCCGGC AGCGCTCCGC GGCCCCGACC CTCGTCGCGC ACGCCTCGGC GCGCGCCCGC GACCTCGGCC CGCGGATCGA GCTCCTGCGC TGCCGCCGCG GCCCGGGCGG CGTCGACCTC CGCGACCTGC TCGCCCGCCT CGCGGCGCGC GGCGTGACGC ACCTGCTCGT GGAGGGCGGG GCGCGGGTCC ACGCGCGCTT CCTGCAGGAG GGGCTCGTCG ATCGCGTCGC CATCTTCGTG GCGCCCAAGA TCGCCGGGGG CGACGGCATC CCGCTCGTCG CCGGCCGGGG GCCGGCGCGG ATGGCGGACG CGCTGTCGCT CGCGGACGTG CGGGTCGAGC GGGTGGGCGA CGACGTCCTC GTGACCGGCA CGCCGGCGCG CCGGGGCCCG CGTGGCCTGT TGGCTAAAAA TCCCCGCCGG GGCTAG
|
Protein sequence | MSRVVSRGRR SPALRARRAA PRAAAPDEAA REAFMRAAVR EATKGLGRTS PNPAVGAVLV KGGRVVARGH HARAGGPHAE VVALRAAGAR ARGADLYTTL EPCDHFGRTP PCSVAVLEAG VRRVFVGSAD PNPLVNGRGV ARLREGGVEV VTGVLRETCD ELNAHWFTFI TERRPHVTLK AAVTLDGRIA TRTGDARWVT GEPARRWVHR LRDRVDAVLV GSGTARADDP RLTTRLPGGR GRDPIRVVLD TDLSLPRDLN LFRQRSAAPT LVAHASARAR DLGPRIELLR CRRGPGGVDL RDLLARLAAR GVTHLLVEGG ARVHARFLQE GLVDRVAIFV APKIAGGDGI PLVAGRGPAR MADALSLADV RVERVGDDVL VTGTPARRGP RGLLAKNPRR G
|
| |