Gene Anae109_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2616 
Symbol 
ID5374807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3031000 
End bp3032367 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content73% 
IMG OID640844141 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_001379801 
Protein GI153005476 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.162079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGA CCTACACGTT GCAGGATCTC CTCGCGGCGC TGCGGCGTCG CCGGCTTCTC 
GCGCTCGTCG TCGCGGGCGC GGTGCTCGTC GTCGGCGTGG CCCTCGCGCT CGGCGTGCCG
TCCGAGTACT CCGCGACCTC GGTCGTCCAG ATCGAGCCGC GGCGGCTGGG ACTCGACTTC
TTCCCCGCCC AGAACGGGAC TCCGTTCGAG GACCGGATGC GCACCATCAA GCACGGCATC
CTCGCGCGCC CGGTGCTCGA GCGGGTGATC CGCGAGACCG ACTTCTACCC CGACCTGCGC
GACGACATGG ACAAGGCGCT CGAGAAGATG AGGCGCAACG TCGAGGTGCG GCTCGAGGGG
GAGGTCCCCT CCGGCGCTCC TGCGCTGCTC TTCGTGGTGG AGGTGCACGG CCGTGATGCC
GAGAAGGTCG CGCGCGCGGC GGAGCTCCTG CCGAAGTACT ACGGCGAGCT CACCCGCCAG
GTGCTGGAGG GGCAGGCGCG GGCCCTGCGC GAGACGCTCG ACGGCCAGGT GGAGCAGATG
GGCAAGGAGC TCGCGGCGCA CGAGCAGCGG CTCCTCGCCT TCAAGGTGGA GCACACCGCC
GAGCTGCCCG AGCTGCTCGA GGACAACGCC CGCGCCATCG GGCGCGCGCA GAGCCAGATC
GAGATGCGGC TCGGCGCGAT CGCCGACGCG CAGCGCCGCC GGCTGGAGGT GCTCTCCTCC
ATCCCCGAGA GCCTGAGCGG TCCAGGGCTC GCCGAGTCCA CCCTCGCCGA CGCGCAGCGC
CGGCTCAACG CCGCCGAGGC GGCCTACGGG GCGGATCACC CCGACGTGAA GCGCGCCCGG
CGCGAGCTGG AGGAGTCGCG TTCGCAGCGC GAGGGCGCCT TCGACAAGTT CCGGAGCGAG
CGGGTGCAGG GTCACCTCGC CCGCCTCGAC GAGGAGGTGC GCGGCCACGA GGCGCAGATC
GCGTCGCTGC GCAAGGAGAT GGCCGGCTAC CAGAAGCGCA TCGACGCGGC GCCGCGCTTC
GGGCAGGAGC TCGCGAACCT GTCGCGGGAC TACGAGGTGC TGCGCGCCAA GTACGCCGCG
ACGATCTCGC GCCGCGCCGA CTCCGCGGCC GCCGAGCAGC TCCTCGCGGC GGACCAGCCC
ACGATGTTCC GCATGGTGGA GACGCCGATC GCGCCGCGGC TGCCCTCCTC GCCGGATCGG
CCGAAGCTCC TGTGGATCGC GGTGCTCGCC GCCATCGCCC TGGGGCTCGG GGCGGCGGCG
CTCGCGGAGT GGCTGGACGC CTCGATGCGA GGGCCGGAGG ACGCCGCGAC GCTGGGCGTG
CCGGTGCTCG CCGCCATCCC GCGCATCGAC CGTCGGCGGG CTTCCTAG
 
Protein sequence
MERTYTLQDL LAALRRRRLL ALVVAGAVLV VGVALALGVP SEYSATSVVQ IEPRRLGLDF 
FPAQNGTPFE DRMRTIKHGI LARPVLERVI RETDFYPDLR DDMDKALEKM RRNVEVRLEG
EVPSGAPALL FVVEVHGRDA EKVARAAELL PKYYGELTRQ VLEGQARALR ETLDGQVEQM
GKELAAHEQR LLAFKVEHTA ELPELLEDNA RAIGRAQSQI EMRLGAIADA QRRRLEVLSS
IPESLSGPGL AESTLADAQR RLNAAEAAYG ADHPDVKRAR RELEESRSQR EGAFDKFRSE
RVQGHLARLD EEVRGHEAQI ASLRKEMAGY QKRIDAAPRF GQELANLSRD YEVLRAKYAA
TISRRADSAA AEQLLAADQP TMFRMVETPI APRLPSSPDR PKLLWIAVLA AIALGLGAAA
LAEWLDASMR GPEDAATLGV PVLAAIPRID RRRAS