Gene Anae109_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2505 
Symbol 
ID5376909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2902377 
End bp2903408 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content79% 
IMG OID640844024 
Producthistidine--tRNA ligase 
Protein accessionYP_001379690 
Protein GI153005365 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis 
TIGRFAM ID[TIGR00443] ATP phosphoribosyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.000404758 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTCGATC TCTCGCTCCC GTCCGGCCTG CGCGATCTCC TCCCGGATCA CTCCGCCCAC 
CTCGCCGAGC TGTCCGCGAA GCTGCAGGAG GTGTTCTCGC AGTTCGGGTA CCGGCGGCTG
TTCCTGCCGA CGCTCGAGCG GCTCGACGTC GTGGAGCGCG GCCTGTCGGC CGCGGCGCTC
GCCGACGTGA TGAAGTTCGT GGAGCCGGGC TCGGGCGAGG TCGTGGCGAT CCGGCCCGAC
ATCACCCCGC AGATCGCGCG CCTCTACGCG GCGCGCCCCG ACGCCCTGCC GTCCCCGGCG
CGGCTCTGCT ACGACGGCCC GGTGCTGCGC GCCCGCGAGG CCCGGGCCGG CCGGCCGCGC
GAGGTCTACC AGGCCGGCGT CGAGCTGCTG GGCGCGGGCG GCGCGTCGGC GGACGCCGAG
GCGCTCGTCG TGCTGGCCCG GGCCCTGGAG CGCGTCGGGC TGGGCTCGGC GGTGGTCGAG
GTCGGGCACG CGCGGTTCGC CCACGCCGTC ATCGACGCGG CGGGTCTCGC CCCGAAGGCC
CGCGGCGCCG CCTGGGACGC GCTCTCGCGC AAGGACGAGG GGGCGCTCGC CGCCCTCGCG
CGGAGGGCGC GCGGCTCCGC CGGCGCCCGC GCCGCGCTCC CGGAGCTCGC GACGCTGTAC
GGCGACGGCG CCCTCGCGCG GGCCAGGGCG CTCGCCCGAC AGGTGCCTGG CGCCGCCGCG
GCCCTCGGCG AGGTCGAGGC GGCGCTGAGG CTCGCCCGCC GGCGCGGCGT GGAGGCGGTG
TCGGTGGACC TCGGCGAGAC CCGCGGGCTC GGGTACTACA CCGGCGTGAC CTTCGCCGGC
TACGCGCCCG GCGCCGGCAG CGCCGTCGCC GCCGGCGGCC GCTACGACGA GCTGCTCGCG
CGCTTCGGCC GGCCCGGCCC CGCCATCGGC TTCGCGGTCG ACCTGGAGTT CGCCACCCAG
GCGCTGGAGC GCGCGAACGG TCGGGCGAAG CGCCCCGCGC GCCCGCGCCG CAGCCCTCCG
CGTCCGCGCT AG
 
Protein sequence
MLDLSLPSGL RDLLPDHSAH LAELSAKLQE VFSQFGYRRL FLPTLERLDV VERGLSAAAL 
ADVMKFVEPG SGEVVAIRPD ITPQIARLYA ARPDALPSPA RLCYDGPVLR AREARAGRPR
EVYQAGVELL GAGGASADAE ALVVLARALE RVGLGSAVVE VGHARFAHAV IDAAGLAPKA
RGAAWDALSR KDEGALAALA RRARGSAGAR AALPELATLY GDGALARARA LARQVPGAAA
ALGEVEAALR LARRRGVEAV SVDLGETRGL GYYTGVTFAG YAPGAGSAVA AGGRYDELLA
RFGRPGPAIG FAVDLEFATQ ALERANGRAK RPARPRRSPP RPR