| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2498 |
|---|
| Symbol | |
|---|
| ID | 5377255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 2894687 |
|---|
| End bp | 2895202 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640844017 |
|---|
| Product | CarD family transcriptional regulator |
|---|
| Protein accession | YP_001379683 |
|---|
| Protein GI | 153005358 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.860997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.00028149 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAA CGCAGGCTAC TCAGATGGCC CCGAATTTCA AGGTCGGGGA CAAGGCGGTT
TATCCCGGCC AGGGGGTCGG CGAGGTCATG GGAATCGAGC ACAAGGAGGT CGCCGGCCAG
CGGCAGTCCT TCTACGTGCT CCGCATCCTC GAGAACGGGA TGAAGATCAT GATCCCGATG
AACAAGGTGG GCTCCGTCGG TCTCCGCGAG ATCATCGGCG AGAAGGACGT CCGCAGGGTC
TACACGATCC TCCGCGAGAA GGAGGTCTCG GTCGACTCGA CCACCTGGAA CCGCCGCTAC
CGGGAGTACA TGGACAAGAT CAAGACCGGC AGCGTGTTCG AGATCGCCGA GGTGCTGCGC
GATCTCTACC TGCTCCGGTC GGACAAGGAC CTGTCCTTCG GAGAGCGGAA GATGCTCGAC
ACCGCACGGT CGCTCCTCAT CAAGGAGCTC GCGATCGCGA AGGAGTGCGG CGAGGACGAC
GTCGAGGACG ACCTGAAGAA GATCTTCAAC TGTTGA
|
|---|
| Protein sequence | MPATQATQMA PNFKVGDKAV YPGQGVGEVM GIEHKEVAGQ RQSFYVLRIL ENGMKIMIPM
NKVGSVGLRE IIGEKDVRRV YTILREKEVS VDSTTWNRRY REYMDKIKTG SVFEIAEVLR
DLYLLRSDKD LSFGERKMLD TARSLLIKEL AIAKECGEDD VEDDLKKIFN C
|
|---|
| |