Gene Anae109_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2464 
Symbol 
ID5377483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2858928 
End bp2859686 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content76% 
IMG OID640843983 
ProductTPR repeat-containing protein 
Protein accessionYP_001379649 
Protein GI153005324 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID[TIGR02521] type IV pilus biogenesis/stability protein PilW 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.545805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCT CGATCGCCCG CACGCTCCTC CTCGTGGCCG CGGCCGCCCT CGGCTGCGCC 
CACCGCCCGA GCGCGAAGGA GCGGCGCGCG GCCGAGATCC ACCACGACCT CGCCGTGGAG
GCGTTCCGCG CCGGACGCGC CCCCGACGCG CTGCGCGAGT ACGACGCCGC GCTCGCCATC
GACGGACGGC TCGCCGAGGC GCACCGCGGC CGCGGCCTCG TCCTCGACTT CGCCTTCGCC
CGGATCGACG AGGCGGAGCG CGCCTACCGC CGCGCGCTCG AGCTGCGGCC GGAGTACCCC
GAGGCCCACA ACGACCTGGG GCAGCTCCTC GCCAGGACCG GGCGGCACGA GGAGGCGCTG
CGCGAGTTCG ACCTCGCCCT CGGCGACATG ACGTACCGGG AGCCGTACGT CGCCCGCTGC
AACAAGGGGC TGGCGCTGTG GCGCATGGGG CGCCGGGAGG AGGGCCACGC GGAGCTCCGC
GCCTGCCTCT CCCTCGCGCC GTCCTTCTGC AAGGGGCGCC GCGAGCTCGG GCGCATCCTC
CTCGACGAGG GGAAGATGGC CGAGGGCATC ACCGAGCTCG CCGCCTACGC GCGGAGCTGC
GAGAAGGTCC CGGACGCGCA CCTCCAGCTC GGCCTCGCGC GGATGCGGGC CGGCGACGTC
CCGGGCGCGC GCGAGTCGTT CGAGCGCTGC GCCGAGCTCG CCCCGCAAGG CGGGGAGGGC
GACGAGTGCC GCCGCAGCCT CTCCCTGCTC GTCGAGTGA
 
Protein sequence
MTRSIARTLL LVAAAALGCA HRPSAKERRA AEIHHDLAVE AFRAGRAPDA LREYDAALAI 
DGRLAEAHRG RGLVLDFAFA RIDEAERAYR RALELRPEYP EAHNDLGQLL ARTGRHEEAL
REFDLALGDM TYREPYVARC NKGLALWRMG RREEGHAELR ACLSLAPSFC KGRRELGRIL
LDEGKMAEGI TELAAYARSC EKVPDAHLQL GLARMRAGDV PGARESFERC AELAPQGGEG
DECRRSLSLL VE