Gene Anae109_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2223 
SymbolrplJ 
ID5377393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2526060 
End bp2526584 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID640843735 
Product50S ribosomal protein L10 
Protein accessionYP_001379409 
Protein GI153005084 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00194446 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACCGGA CGGAAAAAGA GCAGGTCATC GGCGAGCTCC ACGAGAAGAT GGCGATGGCG 
AAGGCGGCCA TCCTCGCGGA GCCCAAGGGG CTGAACGTCG CGACCGTCAC CGAGCTTCGA
CGCAAGCTGC GTGAGGCGAA GGTGGAGTAC CGGATCGTGA AGAACACCCT CGCCGCGCGC
GCCGCCAAGG GCACGCCGGT GGAGTCGATC GCCGAGAAGT TCGTGGGGCC GACGGCGCTC
GTCATGAGCT ACGACGACGT CGTCACGCCG GCGAAGCTCC TCGCGGACTT CATGAAGGAC
CGCGAGAACT TCACCATTCG CACCGCGGTG ATCGAGGGGC GAGTGGTCGA CGCGAAGGGG
ATCCAGTCCC TGGCGAAGAT GCCGGGGCTC CAGGAGCTCC GCGGCCAGAT CGCCGCCATG
ATCGCGCAGC CCGCGACCCA GCTCGCGCGC GTTCTCGGGG CCCCGGGCCA GCAGCTGGCC
CGCGTCCTCG GCGCACGCCG CGAGCAGCTC GAGAAGCAGT CTTAA
 
Protein sequence
MNRTEKEQVI GELHEKMAMA KAAILAEPKG LNVATVTELR RKLREAKVEY RIVKNTLAAR 
AAKGTPVESI AEKFVGPTAL VMSYDDVVTP AKLLADFMKD RENFTIRTAV IEGRVVDAKG
IQSLAKMPGL QELRGQIAAM IAQPATQLAR VLGAPGQQLA RVLGARREQL EKQS