| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2218 |
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| Symbol | |
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| ID | 5377186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | - |
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| Start bp | 2515140 |
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| End bp | 2515565 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640843730 |
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| Product | nickel responsive regulator |
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| Protein accession | YP_001379404 |
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| Protein GI | 153005079 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0455847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00550238 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGCGCCA TGCTGGAACG CATCGGCATC TCCCTCGAGC GCAGCCTGCT CGAGCAGTTC
GACGAGCTCA TCGAGCGCAA GGGCTACGTC AACCGTTCGG AGGCCGTGCG GGACCTCATC
CGCGACCAGC TCGTGCAACG CCAGTGGTCG GAGTCGGAGG GCGGCGAGCA GGTCGCGGTC
GTGGCCATCG TCTACGACCA CGAGTCCTCG AGCCTCGCGC AGAAGCTCAC CCACATCCAG
CACGAGAACC ACCAGGCGGT GGTCTCCGCG CTGCACGTCC ACATGGACGC GCACAACTGC
CTCGAGGTGC TCGTGCTGCG CGGGCGCGCC GGCGAGATCC TCCAGATGGC GGACAGCCTG
GTGGCCACGC GCGGGGTGAA GTACGGCAAG GTCGTCCCTG CGACGACCGG TGAGGCCCTG
CGGTAG
|
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| Protein sequence | MRAMLERIGI SLERSLLEQF DELIERKGYV NRSEAVRDLI RDQLVQRQWS ESEGGEQVAV
VAIVYDHESS SLAQKLTHIQ HENHQAVVSA LHVHMDAHNC LEVLVLRGRA GEILQMADSL
VATRGVKYGK VVPATTGEAL R
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