Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_1974 |
Symbol | |
ID | 5377078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 2236212 |
End bp | 2236928 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 640843484 |
Product | pseudouridine synthase |
Protein accession | YP_001379161 |
Protein GI | 153004836 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGG GCGCGGAGGC GGGCGGGCCG CGGGTCCTCC TCGCGGACGC GGCGCTGCTC GTCGTGGACA AGCCGGCGGG GCGCCTCGTC ATCCCCGGCC GCGGCGGCGA CGAGCTCAGC CTGCGCGAGG AGCTCGAGGC GGCGCACGGC CGGCTCTGGG TGGTGCACCG GCTGGATCGT GGCACCACCG GGGTGCTCGT GTTCGCGCGG ACGGCGGAGG CGCACCGCGC GCTGAACCTC GCCTTCGATC GCGGGGAGCC GCGCAAGCGC TACGCCGCGA TCGTGCGCGG CGATCCGCCC GCCGAGGCGT GCCTCGACGC ACCCATCGCG CCCGCGCGGC GCGGGCGGAT GCGCCCCGCG CGCCCGGGAG ACCCGCGCGC CAAGGCCGCG GTGACGCGGA TCCGGACCCT CGAGACCTTC CCGCCGCGCG CCTGGGCGGG CGGCGCGCTC GCCCTCGTCG AGGCGGCCCC GGAGACGGGG CGCACCCACC AGATCCGCGT CCACCTCATG CACGCGGGGT ACCCGCTGGC GGTGGACCCG GACTACGGCG ACGAGGGCCC CTTGCACGGC CCGGACGCGC GCGTGCTCCT CTCCCGCACG CCGCTACACG CCTCCCGGCT GGAGCTCCGG CACCCCTCGA CCGGCGCGAC GCTGGTGCTG GAGGCGCCGC TCCCGGCCGA CATGGCGGAG GCGCTCCAGG CGCTGCGGGC GGGGTGA
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Protein sequence | MSAGAEAGGP RVLLADAALL VVDKPAGRLV IPGRGGDELS LREELEAAHG RLWVVHRLDR GTTGVLVFAR TAEAHRALNL AFDRGEPRKR YAAIVRGDPP AEACLDAPIA PARRGRMRPA RPGDPRAKAA VTRIRTLETF PPRAWAGGAL ALVEAAPETG RTHQIRVHLM HAGYPLAVDP DYGDEGPLHG PDARVLLSRT PLHASRLELR HPSTGATLVL EAPLPADMAE ALQALRAG
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