| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_1912 |
|---|
| Symbol | rplD |
|---|
| ID | 5378151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 2184823 |
|---|
| End bp | 2185443 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640843421 |
|---|
| Product | 50S ribosomal protein L4 |
|---|
| Protein accession | YP_001379099 |
|---|
| Protein GI | 153004774 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0088] Ribosomal protein L4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.224726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGT TCGACGTCTA CGACCTCGAC AAGAAGAAGG TGGGCGAGAT CGAGCTCGCC
GACGCCGTCT TCGCGGGCGA GGTGAACGAG CACCTCTTCT ACGAGGTGGT GAAGGCGAAG
CTCGCCTCCG ATCGCTCGGG CACCCACGCC GTGAAGAACC GGTCCCTCGT GTCCGGCGGC
GGCAAGAAGC CCTGGAAGCA GAAGCACACC GGTCGCGCCC GTCAGGGCTC GACGCGGGCG
TCGCAGTGGG TGGGCGGCGG CAAGGCCATG GGGCCGAAGC CGCGCGACTA CTCCTACGAC
GTTCCGAAGA AGGTCCGGAA GGCGGCCCTG CGCTCGGCGC TCGCGCTCCG CAGCCAGGAG
CAGAAGCTCG TCATCGTGCA GGAGTGGAAG CCGGCCGAGC CGAAGACCTC CGCCGCGGCG
AAGGTGCTCG CGAAGCTCGG CGCGAGGAAG GCGCTCGTGG TGGACGCGGC CGCGAACGCC
GCGCTCGCGA GGAGCGTGCG GAACCTCGAC GGCTCGGACT TCCTCGCGGC CGAGGGGCTC
AACGTCTACG ACATCCTGAA GCACGACGCG CTCGTGCTGA CGGCCGAGAC CGCGAAGATG
CTGGAGGCCA GCCTGTCATG A
|
|---|
| Protein sequence | MAKFDVYDLD KKKVGEIELA DAVFAGEVNE HLFYEVVKAK LASDRSGTHA VKNRSLVSGG
GKKPWKQKHT GRARQGSTRA SQWVGGGKAM GPKPRDYSYD VPKKVRKAAL RSALALRSQE
QKLVIVQEWK PAEPKTSAAA KVLAKLGARK ALVVDAAANA ALARSVRNLD GSDFLAAEGL
NVYDILKHDA LVLTAETAKM LEASLS
|
|---|
| |