Gene Anae109_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1875 
Symbol 
ID5375047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2149482 
End bp2150918 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content74% 
IMG OID640843384 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_001379062 
Protein GI153004737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.15544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CCGACCCGCG CCCCGCGCGC ACGCTGTTCG AGAAGGTCTG GGACGCGCAC 
GTCGTCCGGG CGGAGACGCC CGAGACGCCC GCCGTCCTCT ACATCGATCT CCACCTCATG
CACGAGGTGA CGAGCCCGCA GGCGTTCTCG ATGCTGCGCG AGCGCGGCCT GAAGGTCCGG
CGCCCGGACC GGACGCTCGC CACCACCGAC CACTCCACGC CGACGCTGCC GCGGCTCCCC
GACGGCCGCT GGCCGTTCTT CGACGCCCAG AACGAGGCGC AGGTCGCCCA GATCGAGAAG
AACGCCCGCG ACTTCGGGGT GGAGCTCCAC GGCCTCGGCG ACCCGCAGCA GGGCGTCGTG
CACGTCTTCG GCCCGGAGAT GGGCGCGACG CAGCCCGGGA TGACGGTGGT CTGCGGCGAC
AGCCACACCG CCACGCACGG CGCGTTCGGC GCGCTCGCCT TCGGGATCGG GACGTCCGAG
GTCGGCCACG TCCTCGCGAC CCAGTGCCTG CTCCAGCGCA AGCCGCGCTC GCTCGCCATC
CGGGTGGACG GGGCGCTGCA GCCGGGCGTC ACGGCGAAGG ACCTGATCCT CGCCATCATC
GCCCAGATCG GCGTCGGCGG CGGCACCGGC CACGTGATGG AGTTCACCGG TCCGGCGGTC
CGCGCCCTCA CCATGGAAGG GCGCATGACC CTCTGCAACA TGGCGATCGA GGGCGGCGCC
CGGGCCGGAA TGATCGCGCC CGACGACGTC ACCTTCCAGT GGCTCGCCGG GAAGCCGCGG
GTGCCGCAGG GCGCCGCGTT CGACGCGGCG GTCGCGAGGT GGCGTGAGCT GCCGACGGAC
GCCGGCGCGC GCTACGACCG CGAGGTGACG GTCGACGTGT CGCGGCTCGA GCCCATGGTC
ACCTTCGGCA CCAACCCGGC GCAGGGGATC CCGGTGACCG GGCGCATCCC CGATCCGGGC
GCCGAGAAGG ACCCCTCGGC GCGCGCGACG CTCGAGAGCG CGCTCCGCTA CATGGCGCTC
GCTCCCGGCA AGCCCATCCT CGGCCAGAAG GTGGACGTCG TGTTCGTGGG CAGCTGCACG
AACGGCCGGC TCGAGGACCT GCGCGAGGCG GCGAGGGTGA TGCGCGGCCG CAAGGTGAAG
ACGCGCACGC TCGTCGTGGC GGGCTCTCAC GCCGTGAAGA AGGCGGCGGA GGCGGAGGGG
CTCGACCGCA TCTTCCGCGA GGCGGGCGCC GAGTGGCGCG AGCCGGGCTG CTCGATGTGC
CTCGCCATGA ACGGCGACAT GCTCGAGCCC GGGCAGTACT GCGTCTCGAC GTCGAACCGG
AACTTCGAGG GCCGCCAGGG GCCCGGCGGG CGCACGCTGC TCGCGAGCCC GGCGACGGCG
GCGGCGGCGG CCGTCTCGGG CGCGGTCGCG GACCCGCGCC GGCTGGTGGA GGGCTAG
 
Protein sequence
MSATDPRPAR TLFEKVWDAH VVRAETPETP AVLYIDLHLM HEVTSPQAFS MLRERGLKVR 
RPDRTLATTD HSTPTLPRLP DGRWPFFDAQ NEAQVAQIEK NARDFGVELH GLGDPQQGVV
HVFGPEMGAT QPGMTVVCGD SHTATHGAFG ALAFGIGTSE VGHVLATQCL LQRKPRSLAI
RVDGALQPGV TAKDLILAII AQIGVGGGTG HVMEFTGPAV RALTMEGRMT LCNMAIEGGA
RAGMIAPDDV TFQWLAGKPR VPQGAAFDAA VARWRELPTD AGARYDREVT VDVSRLEPMV
TFGTNPAQGI PVTGRIPDPG AEKDPSARAT LESALRYMAL APGKPILGQK VDVVFVGSCT
NGRLEDLREA ARVMRGRKVK TRTLVVAGSH AVKKAAEAEG LDRIFREAGA EWREPGCSMC
LAMNGDMLEP GQYCVSTSNR NFEGRQGPGG RTLLASPATA AAAAVSGAVA DPRRLVEG