Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_1579 |
Symbol | |
ID | 5375743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 1776474 |
End bp | 1777232 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640843088 |
Product | rhomboid family protein |
Protein accession | YP_001378767 |
Protein GI | 153004442 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.279558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00570549 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCCCCT ACCGCGACGA GAACCAGACG CAGCGCCGGT CCTACGTCAC CCTCGCCTTC ATCGCCCTGA ACGTCCTCGC GTGGGTGCTC GTGCAGGGCG CGGGCTCGGA CCTCCCGCTC ATGCAGTCCG TGTGCGACCT CGGGCTCATC CCCGGCGAGC TCACCGGCGC CCTTCCGCCC GGGACGGCCT TCCCGATGGG GGAGGGGATC GCGTGCCTGA CGGACCCGGG GACGCAGGCC TCGCACCTCC TCACCTCCAT GTTCCTGCAC GGCTCCTGGA TGCACCTGCT CGGGAACATG TGGTTCCTCT GGATCTTCGG GGACAACGTC GAGGACTCGA TGACGCGGCC GCGCTTCCTG GCGTTCTACG TCCTCTGCGG GCTGGCGGCG GCGTTCGCGC AGGTGGTCAC GAGCCCGGCC TCGGGCGTCC CGATGGTGGG CGCCTCGGGC GCGATCAGCG GCGTGATGGG CGCCTACCTC GTGCTGTACC CGCGCGTCCG GGTGTTCGCC CTCGTGCCGA TCGGCTTCTT CCTCACGTCC ATCGCGTTGC CCGCGTGGAT GATGCTCGTG TACTGGGCCG GGCTCCAGCT CCTGAGCGGC GTCGCGTCGA TGGGGCAGAG CGGCGGCGGC GTCGCCTTCT GGGCGCACGT CGGGGGCTTC GCCGCGGGCG TGGTCCTCGT GAAGCTCTTC GCGCGCGGCG ATCACGTCCG CGAGCACCGC ACCCACCATT GGCGCCCGAG GCGCGTGCGC GGGTGGTGA
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Protein sequence | MFPYRDENQT QRRSYVTLAF IALNVLAWVL VQGAGSDLPL MQSVCDLGLI PGELTGALPP GTAFPMGEGI ACLTDPGTQA SHLLTSMFLH GSWMHLLGNM WFLWIFGDNV EDSMTRPRFL AFYVLCGLAA AFAQVVTSPA SGVPMVGASG AISGVMGAYL VLYPRVRVFA LVPIGFFLTS IALPAWMMLV YWAGLQLLSG VASMGQSGGG VAFWAHVGGF AAGVVLVKLF ARGDHVREHR THHWRPRRVR GW
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