Gene Anae109_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1563 
Symbol 
ID5377415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1762102 
End bp1763148 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content73% 
IMG OID640843072 
ProductFis family transcriptional regulator 
Protein accessionYP_001378751 
Protein GI153004426 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.290119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.356277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCG TCATGGACGA GGATGCCCCC GAGGTCGAGC TCCCCGAGGC GCTCGGCGCC 
GGGATCGAGG GCCGGAGCCC GGCGCTCAGG CGAGCGCTCC AGGGCGTGGC GCAGGTCGCG
GCCACGGACG CGACGGTGCT CCTGCTGGGG GAGACCGGGA CCGGGAAGGA GCTCTTCGCG
CGCGCGATCC ACGACCGGAG CGGCCGCAGC GGCCGCCCGC TCGTCAAGGT GAACTGCGCG
GCGATGCCGG CCGCGCTCAT CGAGAGCGAG CTCTTCGGGC ACGAGCGCGG GGCGTTCACC
GGGGCGACCC GGCGGCGCGA CGGCCGGTTC GCGATGGCGG ACGGAGGGAC GATCTTCCTC
GACGAGATCG GCGAGCTGCC GCTCGAGCTC CAGGGGAAGC TCCTGCGCGT GCTGCAGGAG
GGCGAGTTCG AGCTCGTCGG AGGATCGCAG ACGCGGAGGG TCGACGTCCG CGTGATCGCC
GCGACGAACC GAGACCTGCA GGAGGCCGTC CGTCGGGGGC AATTCCGGGA GGATCTGTAC
TATCGGCTCA GCGTGTTCCC GCTCCATCTC CCGCCGCTCC GCGAGCGAGG GGACGACGTG
GTGCTGCTCG CCACCGCGAT GGCGGAGAGG CTCGCACGCG GCCTCGGCAA GAAGGTCGTG
CCGCCCGGCC CGGCCGACGT CGCGGCGCTC CTCAGCCATC CGTGGCCGGG GAACGTCCGC
GAGCTGCGGA ACGTGATCGA GCGCGCGATC ATCACCTCGT CGGACGGCCT GCTGCGCCTC
GACCGCTGGC TGTCCACCGC CGCGTTCGCG CAGGGAGACC CGTCCGCCTC GCGAGCCGCC
CCGGGACGAA GCGACGGCGA GATCCTCACG GAGCGCCGCC TGCGTCAGCT CGAGCGGGAG
AACATGATCG CGGCGCTGAC GCGGTCCGGC TGGCGCGTGG GAGGAGAGGG CGGTGCGGCC
GCGCTCCTCG ACGTGAGCCC GTCGACGTTC AAGTCACGCA TGAAGGCCCT CCACATCCAG
CGCCCCGCGA TGGTCGAGGC CGCCTGA
 
Protein sequence
MHAVMDEDAP EVELPEALGA GIEGRSPALR RALQGVAQVA ATDATVLLLG ETGTGKELFA 
RAIHDRSGRS GRPLVKVNCA AMPAALIESE LFGHERGAFT GATRRRDGRF AMADGGTIFL
DEIGELPLEL QGKLLRVLQE GEFELVGGSQ TRRVDVRVIA ATNRDLQEAV RRGQFREDLY
YRLSVFPLHL PPLRERGDDV VLLATAMAER LARGLGKKVV PPGPADVAAL LSHPWPGNVR
ELRNVIERAI ITSSDGLLRL DRWLSTAAFA QGDPSASRAA PGRSDGEILT ERRLRQLERE
NMIAALTRSG WRVGGEGGAA ALLDVSPSTF KSRMKALHIQ RPAMVEAA