Gene Anae109_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1156 
Symbol 
ID5377630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1307297 
End bp1307926 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content78% 
IMG OID640842664 
Productphosphoglycolate phosphatase 
Protein accessionYP_001378348 
Protein GI153004023 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.53294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGC TCGCCATCTT CGATCTCGAC GGCACGCTCG TCGACTCGGT GGACGACCTC 
GCCGCCTCGG TGAACCACGC CCTCGCCGCG CTGGGGCTCC CGCCCCGCCG CCGCGACGAG
ATCCGCGGGT TCGTGGGAGA GGGGGCGCGC CTGCTCCTCG CCCGCGCCGT CGCCCCGCGG
GACGAGCTGC TCGAGCCGGC GCTCGCGCTG TGGCGCGAGC ACTACGACGC GCACTGCCTG
GATCGCACGC GGCTCTTCCC CGGCGTGGAG GCCGCGCTCG CCGGCGCCGG CCGCGCGCTG
GCCGTCCACA CGAACAAGCC GGGGGCGCTC GCCCGCAAGA TCCTCGCCGG CCTGGGCGTC
GCGGGGCGGT TCGCGGCGGT CGTCGGAGGG GACGAGGCGC CGCGCAAGCC CGATCCCGCC
GGGACGCTCG AGCTCATGGC GCGGGTGGGC GCCGCCCCCT CGGACACGCT CTTCGTGGGG
GACAGCCGCA TCGACGCCGC GACGGCGCGC GCCGCGGGTG TCGCGCTCGT GGCGGTGACC
TGGGGCCTCG GCTCGCGCGC GGAGCTCGCC GCGGCGGGCG CCACCGTGTT CGTCGACGAC
GCGGGCGAGC TCGCCGCGTA CCTGCGCTAG
 
Protein sequence
MSRLAIFDLD GTLVDSVDDL AASVNHALAA LGLPPRRRDE IRGFVGEGAR LLLARAVAPR 
DELLEPALAL WREHYDAHCL DRTRLFPGVE AALAGAGRAL AVHTNKPGAL ARKILAGLGV
AGRFAAVVGG DEAPRKPDPA GTLELMARVG AAPSDTLFVG DSRIDAATAR AAGVALVAVT
WGLGSRAELA AAGATVFVDD AGELAAYLR