Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_1108 |
Symbol | |
ID | 5374010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 1257119 |
End bp | 1258018 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640842616 |
Product | RNA polymerase sigma-70 |
Protein accession | YP_001378300 |
Protein GI | 153003975 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0489202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.248396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTT CGACCGGCGC GAGCAGCACC CTCGACCAGT ACCTGCGCGA GATCAACAAG GTCGCGCTCC TCACCGTCGA AGAGGAGCGG CGCCTGGCGC GTGAGTTCCG GGACGAGGGC AAGACCCGCG CCGCCCACAA GCTCGTCGAG GCGAACCTCC GCTTCGTCGT GAAGGTGGCG TTCGAGTACC GCTCCTACGG GCTGAGGATG GCGGACCTCA TCCAGGAAGG GAACATCGGC CTGATGAAGG CCGTCCAGAA GTTCGACCCC GACAAGGAGA TCCGGCTCAT CTCCTACGCG GTCTGGTGGA TCCGCGCGTA CATCCAGAAC CACATCCTGA AGTCCTGGTC GCTCGTGAAG ATCGGGACCA CGCAGGCGCA GCGGAAGCTG TTCTTCTCGC TCGCCCGCAC CCGGCACGAG ATCGAGCGCG TGACCCCCGG CGCCGGCCTC GACTCCGAGG GCATCGACGT GAACCTCGTC GCCAAGAAGC TCCGCGTCCG GGCGAGCGAC GTGGTGGAGA TGCAGCAGCG CATGGAGGGG CGGGACCTCT CGCTCGACGC GCCGGTCGCC GACGGCACGA GCACGCACCT GGAGTTCACC CCGTCCGACG CCGATCCGCA GGACGACGAG CTCGCCCGCG CCGAGGAGGA CGCGATCGTG AACCGCCGCG TCAACGACGC CATGAGCCGG CTCGACCCGC GCGAGCGGCA CATCGTCGAG GCGCGCATCA TGGGCGACGG CAAGGAGACG CTGCGCGATC TCGGGCAGCA CTTCGGCTTC TCGCGGGAGC GCGCGCGCCA GCTCGAGATC CGCGCCCTGG AGAAGCTGCG CCGGGAGCTG CAGCCGCTCG CCGACGAGAT CGGCTACCCG GCGACGCAGG GGGTCGAGGC GGTCGAGTAG
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Protein sequence | MNRSTGASST LDQYLREINK VALLTVEEER RLAREFRDEG KTRAAHKLVE ANLRFVVKVA FEYRSYGLRM ADLIQEGNIG LMKAVQKFDP DKEIRLISYA VWWIRAYIQN HILKSWSLVK IGTTQAQRKL FFSLARTRHE IERVTPGAGL DSEGIDVNLV AKKLRVRASD VVEMQQRMEG RDLSLDAPVA DGTSTHLEFT PSDADPQDDE LARAEEDAIV NRRVNDAMSR LDPRERHIVE ARIMGDGKET LRDLGQHFGF SRERARQLEI RALEKLRREL QPLADEIGYP ATQGVEAVE
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