Gene Anae109_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0405 
Symbol 
ID5378120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp458136 
End bp459512 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content70% 
IMG OID640841914 
Productamino acid/peptide transporter 
Protein accessionYP_001377604 
Protein GI153003279 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3104] Dipeptide/tripeptide permease 
TIGRFAM ID[TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0035417 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00401498 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGCA CCGAGCGCTA TCCACCCCAG GTCAAGTACA TCGTCGGCAA CGAGCTCTGC 
GAGCGCTTCT CGTTCTACGG GATGCGCTCC ATCCTGACGC TCTACATGAT GCAGTACCTG
CTCTTCGCCC AGCAGGACGC GAAGGCGTAC TTCCACTACT TCGTGATGGC GAACTACCTC
ACGCCGCTCC TCGGCGGGTG GATCGCCGAC CGGTTCTGGG GCCGCTACCG CACCATCCTG
TGGATCTCGC TCGGCTACGT CGGCGGGCAC GCGGTGCTCG CCATCTGGGA GACGCCCGCG
GGCCTCCTCG CCGGCCTGTC GCTCATCGCG CTCGGCGCGG GCGGCATCAA GCCCTGCGTG
TCGGCGTTCG TGGGCGATCA GTTCGGCCCC ACCCAGAAGA CGCTCATGCA GCGGGTCTAC
GGCTGGTTCT ACTGGTCCAT CAACCTCGGC TCGGCGTCCG CCAACCTGCT CATCCCCTGG
CTCCTGAAGC GGCACGGCCC GTCCGTCGCG TTCGCGATCC CCGGCGTCCT CATGGCGCTC
TCGCTCCTGG TGTTCTGGGC GGGGACGAAG CACTACGTGC AGGCGCCGCC CTCCGGTCCC
AACCCGCACG GCTTCCTGCG CGTGGTCGGC CGCGCGGTGC GCCGGGCCGG CACCGGGCGC
GCCGGCGAGC ACTGGCTCGA CGTGGCGCGC GACCAGCACC CGCCGGAGGC GATCGCCGGC
GCGAAGGCGG TCTTCCGCAT CATGGGCGTG TTCGCGGCGG TGACGCTCTT CTGGACCCTG
TTCGACCAGA AGGCCTCGTC GTGGGTCATC CAGGCGAGCC AGATGGACCT CGTGGTCCGC
GGCTGGGAGA TGTCGCCGGC GCAGCTCCAG GCGGCGAACC CGTTCCTGGT GATGACGCTC
ATCCCGCTCT TCACCTGGGG TGTGTTCCCG TTCCTCGAGC GGCGCGGCGT CGAGCTCTCG
CCGCTCCGGA AGATGACGGC GGGGATGTTC CTCACCGCGC TCTCCTTCGG CGCGGCGGCG
ATCGTGCAGA CGTTCGTCGA TCGCGGCGGC GCCCCGCCGA GCGCGCTCTG GCAGCTCCCC
CAGTACGTGC TGCTCACGGT GGGGGAGGTG CTCGTCTCGG TGACCGGCCT CGAGTTCAGC
TACACCCAGG CGCCGAAGAC CATGCGGAGC ACGATCATGT CGCTCTGGTT CCTGACGATC
GCGCTCGGGA ACCTGCTCAC CGCCGTGCTG ACGCGGGTGG TCTCGCTCGA GGGCGCCGCC
TACTTCTGGC TCTTCGCCGG CCTCATGCTC GCCGCCGCGT TCGCGTTCCG CGAGGTGGCG
CGGCGGTACC GGCCGGTGCC GGCGGCCGTC GAGGCGGGGG TGGTGGCGGA GGGGTGA
 
Protein sequence
MARTERYPPQ VKYIVGNELC ERFSFYGMRS ILTLYMMQYL LFAQQDAKAY FHYFVMANYL 
TPLLGGWIAD RFWGRYRTIL WISLGYVGGH AVLAIWETPA GLLAGLSLIA LGAGGIKPCV
SAFVGDQFGP TQKTLMQRVY GWFYWSINLG SASANLLIPW LLKRHGPSVA FAIPGVLMAL
SLLVFWAGTK HYVQAPPSGP NPHGFLRVVG RAVRRAGTGR AGEHWLDVAR DQHPPEAIAG
AKAVFRIMGV FAAVTLFWTL FDQKASSWVI QASQMDLVVR GWEMSPAQLQ AANPFLVMTL
IPLFTWGVFP FLERRGVELS PLRKMTAGMF LTALSFGAAA IVQTFVDRGG APPSALWQLP
QYVLLTVGEV LVSVTGLEFS YTQAPKTMRS TIMSLWFLTI ALGNLLTAVL TRVVSLEGAA
YFWLFAGLML AAAFAFREVA RRYRPVPAAV EAGVVAEG