| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0057 |
|---|
| Symbol | |
|---|
| ID | 5377920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 73011 |
|---|
| End bp | 74003 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640841571 |
|---|
| Product | putative mRNA 3'-end processing factor |
|---|
| Protein accession | YP_001377261 |
|---|
| Protein GI | 153002936 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.251824 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGGC CGCCGATCGA GCTCCACAAG GGAGAGCTCC GCATCACCCA CAGCGCGCTC
CACCTCGACG CGAAGCGCCG CGTCGAGTGC GCGTTCGTCT CGCACGCGCA CGGCGACCAC
ATCGGCCGCC ACGACCGCAC CATCGCGACC ACCCCGACCC TGGCGCTCAT GCGCCACCGG
CTGGGGGAGC CGAAGCGGCG CAAGACCGAG GCGCTCCCCG TCGACTACCG CACGCCGTTC
GGGCTCGGCG AGCTCACCCT CGAGCTGTTC AGCGCGGGCC ACGTGCTCGG CTCGGCGCAG
CTGCGCGTGA CCCGCAACGA GGTGGCGGTG GGCTACACCG GCGACCTCTG CACCGAGCCC
ACCCACGCCG CGGAGCGCGC GGACGTGATG CCGTGCGACG TGCTCGTGAT GGAGTCGACC
TTCGGGCTGC CGCGCTACGT CTTCCCGCCC AAGGAGGAGA CCCTCGCGGC GGTCCGCAGG
TTCGTGGACG ACGCCCTGTC GGACGGCGTC ACCCCGGTGC TCCTCGGCTA CGCGCTCGGC
AAGGCCCAGG AGATCCTGAA GTTCCTCTCC GACGCGGGCT ACCCCTGCCG CGCCCACCCG
GTGGTGCACG CGGTGAACCG GGTCTACGAG GCCCACGGCG TGGCGTTCCC GAACGTGCGG
GCGCTCGGGC CGGAGGGGCC GGAGCGTGGG GAGGTGGTCG TCGCCCCCCC GCACCTCGCG
CGCAGCCCCG CGATGCGGGG CGTGGGAAAG CGCCGCACCG CCATCCTCAC CGGCTGGGCG
ATCGACGGCG GTCGCTGGTT CCGCGGCGTG GACGCGGCCT TCCCGCTCTC CGACCACGCC
GACTTCCCGT CCCTCGTGCG CTACGCGAAG GCGACCGGCG CCGGGCGCGT CTTCACCGTG
CACGGCCACG CCGACGCGCT CTCCGCCGCG CTCCGCAAGG AGGGCGTGCG GTCGGAGCCG
TTGCGCGAGC ACATGCAGCT GGAATTGCTG TAG
|
|---|
| Protein sequence | MRRPPIELHK GELRITHSAL HLDAKRRVEC AFVSHAHGDH IGRHDRTIAT TPTLALMRHR
LGEPKRRKTE ALPVDYRTPF GLGELTLELF SAGHVLGSAQ LRVTRNEVAV GYTGDLCTEP
THAAERADVM PCDVLVMEST FGLPRYVFPP KEETLAAVRR FVDDALSDGV TPVLLGYALG
KAQEILKFLS DAGYPCRAHP VVHAVNRVYE AHGVAFPNVR ALGPEGPERG EVVVAPPHLA
RSPAMRGVGK RRTAILTGWA IDGGRWFRGV DAAFPLSDHA DFPSLVRYAK ATGAGRVFTV
HGHADALSAA LRKEGVRSEP LREHMQLELL
|
|---|
| |