| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2177 |
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| Symbol | |
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| ID | 6274467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2659383 |
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| End bp | 2662736 |
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| Gene Length | 3354 bp |
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| Protein Length | 1117 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642614238 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_001878765 |
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| Protein GI | 187736653 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAGT GGATTCTAAC CAAGATTGTC GGCACCAAAA ACCAGCGTGA AGTGCGCCGT
CTGCGCCCCA TTGTGGAACA AATCGTCTCC ATTGAAGAAT CATGGAACGG CAAGGGACAG
GAATTCCTGC TTGAGAAAAC GAGGGAATGG CAAGGGTACC TCCATCGCTT CCTCCCCATG
GATCTGCCCC CCGTGCGCAT TGTGGAAGCC GCGCCCAGGG AAGAGCTGGA GGAAATAGCC
GCCAAACTGA ACGCCCGTTT TGAATCCCTG AAAAGCGAAT TCTCTTCCCT CCCTGCGGTG
GAAGCCACTC CCGCCTCCAT TGAAGAAGGG AAAGCCGCCT GGAACAACAT TACGCCCCAG
TTTGACAAGC TGCGGGAACG CTACCTGAAC CAGATACTGC CGGAGGCCTT CGCCGCCGTC
AAACACGGCG CCCGCCTGCT CTGCGGGGAA GAACGCGATA TCTGCGGTCA AAAACAGGTT
TGGGACATGG TCCACTTTGA CGTGCAGCTG CTGGGCGGCA TTGCCCTGCA CCGCGGCTAC
ATTGCGGAAA TGGCCACGGG GGAAGGGAAA ACGCTTGTAG CCACCCTCCC CGTTTACCTG
AATGCCCTGA CCGGCATGGG TGTGCATGTG GTGACCGTGA ACGATTATCT GGCGCGCCGC
GACTCGGAAT GGATGGGCAT GCTCTTCCAG TTCCTGGGGC TGACTGTCGG CTGCATCCAG
AGCATGATGC CCTCCCAACT CCGCCGGGAG CAATACGCCT GCGACATCAC TTACGGCACC
AACGCCGAAT TCGGCTTCGA CTACCTGCGC GACAACGGCA TGGCAACCTC CAAGTCCGAA
CAGGTGCAGC GCGGGCACTA CTTCTCCATT GTGGACGAAG TGGACTCCAT CCTTATTGAC
GAAGCCCGCA CCCCCCTCAT CATTTCCGGC CCTGCGGTCG TCACCCGGGA ACAGCAGTAC
GATACCCTGC GCCCCGCCAT TGAGCGCGTG GTGAAGGCCC AGACGGACCT TTGCAACGAA
CTGATGGCCC AGGCCCTGAA AGCCCAGGAA GAAGGCCGCA CGGAAGAAGT GGGCCGCTGC
CTGTTCAAGG TAAAAATGGG CCAGCCCCGC CACCGCGCCT TCCTGCGCGC CATGCAGGAT
CCCGAGCTGC GCCGCATCGT GGAAAAATAT GAACTGACCC TTTACCAGGA TACCCGCAAG
AAGGAACTCT ACAAGCTGAA GGAGGAAATG TTCTTCACCG TGGATGAAAA AACCCACGAC
GCCGACCTGA TGGAAAAAGG CCGGGAAGTC ATCTCTCCCG GCCATCCGGA AGATTTCGTG
CTGCCGGATT TGGGAACCGC CTTTGCGGAA ATGGACGAAG ATCCGCGCCT GACGGAAAAA
GACAAACTGC GCCGCAAAAA TGAACTGACC AAACAGCTTG ACGAAACGGG AGCGCGCCTG
CACACCACCT CCCAGCTGCT GAAGGCCTAC TGCATTTACG AAAAAGACGT GGAATACGTC
GTCAAGGAAG GCAAGGTCAT CATCATCGAC CAGAATACGG GCCGTGAAAT GCCGGGACGC
CGCTGGAGCG ACGGTCTGCA CCAGGCGGTG GAAGCCAAGG AAGGCGTGGA AGTGGAGCGG
GAAAACCAGA CGTACGCGAC CATCACCATC CAGAACTACT TCCGCCTGTA CAAAAAACTG
GCGGGCATGA CCGGCACGGC GGAAACGGAA GCTGCGGAAT TCCATGATAT TTACAAGCTG
GACGTTCTTC CCATCCCGAC CAACCGCCCC TGCATCCGCA AGGATCAGAA TGACCTCATC
TTCAAATCCC GCCGTGAAAA ATTCAATGCG GTGGTCAACA AAATCCAGGA ACTTCACGAC
AAAGGCCAGC CCATCCTGAT CGGCACGGCC AGCGTGGACG CCTCCGAAAC GCTCTCCCGC
ATGCTCAAGA GGGCCAAAAT CCCCCATGAA GTTCTAAACG CAAAAAACCA CCAGCGCGAA
GCGGAAATCG TGGCGCAGGC CGGCAAGCGC GGAGCCGTCA CCGTCTCCAC CAACATGGCG
GGCCGCGGCA CGGACATCAA ACTGGGCGAA GGCGTAGCCG ACCTCGGCGG CCTCTTCGTC
CTGGGTACGG AACGCCATGA ATCCCGCCGC ATTGACCGCC AGCTGCGCGG CCGCTGCTCC
CGCCAGGGGG ACCCCGGCGC CTCACAGTTC TTCATCTCCT TTGAAGACGA CCTGATGCGC
AACTTCGGCG CGGCGGAACG CATGACCAAG ATGATGGAAC GCCTGGGCGT AGCCGACGGT
GAAGCGCTGG AACACAGTTT CCTGAACAAA TCCGTGGAAT CCGCCCAGAA ACGGGTGGAA
CAGCGCAACT ACATGTGGCG CAAGCACGTG CTGGACTATG ACGACGTAAT GAACAAGCAG
CGCGAAATCG TTTACGGATA CCGGAATGAA GTGCTTTCCA CGGAAAACCC GCGCGAAATG
ATTTACGATA TTCTGGAAGA AGTAATCGCC ACGCGCGCCC ATGAATTCCT GGACCCGGAT
GCGGAAGGCG TCACCCACCC GGACGAATTG CTCGCCTGGA TGAACGCCTC CTTCCCGCTG
GGGCTCACGG CAGAGGCCGC CAAGCTGGAA GAACGGCCCA TAGACGACAC CATTGCCTTC
CTCATTGACA AGGTCAAGTC CACTTATGAA GACAAGGCTT CCCGCGAACG CCCGGAATAC
CTGGACCACA TGGAACGCCA GATCATCCTG GGGGCCATTG ACAAAATGTG GCAGGAACAC
CTGTACAACA TGGACTCCCT GCGGGAAGGC GTGCGCCTCC GCGCCCAGGG GCAGAAAGAC
CCCCTGGTGG AATACAAATC GGAAGCTTAC GATCTCTTCA TCACCCTGAT GGAAAGCATC
AAGAGCGAAG CCATCAGCAA CCTCTTCAAG AGCACCACCA ACCTGGACGC CTTTGAGGAC
TTCCTGGCCA GCCTGCCCCA GTTTGAATCT TCCGACGAAA ACCAGGAAGG CGGAACCAGC
CTGCCGGAAA TCGGCTTTGA CGGCATGCCT TCGGACCTGC TCTCCGCCCT GAGGGAACAA
GTCTCCCGGG CACGTGAACA ACAATCCGCC CGGCAGGCGG AACCGGAACA GGCCCCGGCC
GTCATTTCCG ACGCCACCAC CATTGGGGAA GGTTACAAAC CAGCCGTGGC GGAACCCAAA
CTGGTCATGC CCAAGCGCAA GGTCAGCGTC GTGCTCCGCA AGGAAGAAGC CCCCCAGGCG
CCGGCAGAAA CGCCGGTCCC CGGAGAAGGG GAAGAAATTG CCGTCACTCT GGACTCCCAG
GACTTTGCGG AAACCATGGA CAACCGGGAT TCCGCGGATA CCCGCACATT CTAA
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| Protein sequence | MIKWILTKIV GTKNQREVRR LRPIVEQIVS IEESWNGKGQ EFLLEKTREW QGYLHRFLPM
DLPPVRIVEA APREELEEIA AKLNARFESL KSEFSSLPAV EATPASIEEG KAAWNNITPQ
FDKLRERYLN QILPEAFAAV KHGARLLCGE ERDICGQKQV WDMVHFDVQL LGGIALHRGY
IAEMATGEGK TLVATLPVYL NALTGMGVHV VTVNDYLARR DSEWMGMLFQ FLGLTVGCIQ
SMMPSQLRRE QYACDITYGT NAEFGFDYLR DNGMATSKSE QVQRGHYFSI VDEVDSILID
EARTPLIISG PAVVTREQQY DTLRPAIERV VKAQTDLCNE LMAQALKAQE EGRTEEVGRC
LFKVKMGQPR HRAFLRAMQD PELRRIVEKY ELTLYQDTRK KELYKLKEEM FFTVDEKTHD
ADLMEKGREV ISPGHPEDFV LPDLGTAFAE MDEDPRLTEK DKLRRKNELT KQLDETGARL
HTTSQLLKAY CIYEKDVEYV VKEGKVIIID QNTGREMPGR RWSDGLHQAV EAKEGVEVER
ENQTYATITI QNYFRLYKKL AGMTGTAETE AAEFHDIYKL DVLPIPTNRP CIRKDQNDLI
FKSRREKFNA VVNKIQELHD KGQPILIGTA SVDASETLSR MLKRAKIPHE VLNAKNHQRE
AEIVAQAGKR GAVTVSTNMA GRGTDIKLGE GVADLGGLFV LGTERHESRR IDRQLRGRCS
RQGDPGASQF FISFEDDLMR NFGAAERMTK MMERLGVADG EALEHSFLNK SVESAQKRVE
QRNYMWRKHV LDYDDVMNKQ REIVYGYRNE VLSTENPREM IYDILEEVIA TRAHEFLDPD
AEGVTHPDEL LAWMNASFPL GLTAEAAKLE ERPIDDTIAF LIDKVKSTYE DKASRERPEY
LDHMERQIIL GAIDKMWQEH LYNMDSLREG VRLRAQGQKD PLVEYKSEAY DLFITLMESI
KSEAISNLFK STTNLDAFED FLASLPQFES SDENQEGGTS LPEIGFDGMP SDLLSALREQ
VSRAREQQSA RQAEPEQAPA VISDATTIGE GYKPAVAEPK LVMPKRKVSV VLRKEEAPQA
PAETPVPGEG EEIAVTLDSQ DFAETMDNRD SADTRTF
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