| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2113 |
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| Symbol | |
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| ID | 6275495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2574808 |
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| End bp | 2575917 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642614175 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001878703 |
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| Protein GI | 187736591 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.512598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.05877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCACCTCT ACGTCCACAT TCCTTTCTGC CACCGTATTT GCCCGTACTG CGCTTTCTTC
AAGCACACGC CGGCCTCCAC GGACATGAAA TCATTCATCC GTGCTCTGGG CAGGGAGGCG
GAATCCCGCG CAGCCGCTCT GGCCACAAAC CGCGGAGGGG AAACGGCTAC GCTTTATTTT
GGCGGGGGTA CTCCCTCCAT GCTCTCGGAC ACGCATCTGG GGCATTTTAT GGAAACCCTG
GATCGTCTCG TGCCCGTGGA CAAACTGGAC GAATTCTCCT TTGAGGCCAA CCCCGCCACC
TTTACGGAAA AAAAAGTGCG CTTTTGGCGC AGCCTGGGCA TGACACGTGT CTCCCTGGGC
GTGCAGTCCC TGGATTCCGG CATCCTGCAT CTGCTGGGGC GCGAACATAC CCCGGCCCAG
GCTCTGCACT CCGTGGAAAT GCTGAAAAAT GCGGGAATGC CCCATATCAA CATGGATCTC
ATGTTCGCCA TTCCGGGGCA AACCCTCTCC ATATGGGAAG CCACCCTGAA GGAAGCTGTC
CGCGCCGGAA CGGACCATAT CTCCGCCTAC AACCTCACCT ATGAAGAAGA CACGGAATTC
TTCCGGAGCC TGCTGAGGGG AGAGAAAAGG CAGGATCCGG ACGAAGACGC CGCCTTTTTT
GAACTGGCGG AACACATGCT GGAGGCGGCA GGCTTGCGCC ACTATGAAAC CTCCAACTAC
GCCCGGGAGG GCTGCATCTC CCCCCACAAC ATGGCCTACT GGAAGGGAGA GGACTATGTG
GGCATAGGGC CTGGCGCGGT CAGCACCATC AACGGCATAC GGTACTCCAA CACGCGGGAT
ACGGACGCCT ACATACGCAG CACGCTGGAA AACGGCCTCC CCCTTTCCGA ACAGGAACCC
GTCACCGAGG AAGACTACCG CTTGGAACGC ATTGCCCTGA TGCTCCGGAC GGATGAAGGA
TTGCCGCTGA AATACATTCT GCCGGAATCC CGTCCTCTGC TGGAACAATA CCGGGAACTG
GGCTTGGCGG ACATTTCCCC GGAACAAAGG TTCATCCTGA AAGGCCGCGG ACGCCTGCTC
GTGGACGCCA TCGCAGCGGA ACTGTGCTGA
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| Protein sequence | MHLYVHIPFC HRICPYCAFF KHTPASTDMK SFIRALGREA ESRAAALATN RGGETATLYF
GGGTPSMLSD THLGHFMETL DRLVPVDKLD EFSFEANPAT FTEKKVRFWR SLGMTRVSLG
VQSLDSGILH LLGREHTPAQ ALHSVEMLKN AGMPHINMDL MFAIPGQTLS IWEATLKEAV
RAGTDHISAY NLTYEEDTEF FRSLLRGEKR QDPDEDAAFF ELAEHMLEAA GLRHYETSNY
AREGCISPHN MAYWKGEDYV GIGPGAVSTI NGIRYSNTRD TDAYIRSTLE NGLPLSEQEP
VTEEDYRLER IALMLRTDEG LPLKYILPES RPLLEQYREL GLADISPEQR FILKGRGRLL
VDAIAAELC
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