| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2030 |
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| Symbol | |
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| ID | 6275502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2463586 |
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| End bp | 2466693 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642614091 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001878621 |
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| Protein GI | 187736509 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0107983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000143133 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGCGG ACCTGTTTAT CAAACGCCCC AAATTCGCCA TCGTCATCGC CATCCTGATG
ATGCTGGCTG GCGGCATCTG CCTGAACCAG CTCCCCATTG CGGAGTATCC GGAAATCGCG
CCCACCAGCA TCAACGTGCA GGCCACCTAT ACGGGTGCCA GCGCCCAGGT AGTGATGGAA
ACGCTGGCCT CCCCCATTGA GGAAGAACTC AACGGGTTGG AAAACCTGCT CTATTTCTCC
TCCAAGTCAG ATAACACCGG CGGGTATTCC CTGTCCCTGA CGTTCAAGAG CGGCACGAAT
TCGGACATCA ACATGGTGAA CGTTCAGAAC GCCTTGAAAC GGGTGGAATA CAAACTTCCC
AAGGAGGTGA CGGACCAGGG CATCAAGATC AAGAAACGCT CCTCTGACAT CCTGGGATTC
TTCGCTTTCC GGTCCACCAG CATGAGTTCC CTGGAGCTGA ACAACTTCGT CAAGACCAGG
GTGAAGGATG AGGTTGCCCG CGTACCGGGA ATCTCTGCCG TCAACCTGAT GCCGGAAAAG
AATTACAGCA TGCGCATCTG GCTGGACGCC CTGCGCATGT CCGCCCTGAA TATCACGCCG
GATGACGTTT CCAATGCCAT CAAGGCGCAG AACGTTCAGG CCGCGGCCGG CTCCATCGGC
TCGGAAGGGG AAAACAACTT CATCCAATAC AAGGTGAACG TCACCGGACG ACTGCAGACC
GTGGAGGAAT TCAGCAAGAT TATCGTCCGC ACGGGCCAGG ATGGCCACGT TACCCGGCTG
GACGACATTG CCCGCATTGA GCTGGGCGCG GAAACCTACA CGGGCAGCAG CCGCAACAAC
GGGGAAGACT CCGTGAACAT GGCTGTGTAC CGCCTGGATG ACGCCAATGC CCTGGAAGCC
ATGAACGGCG TGAAAGACAC GCTGGAGAAG CTGGAAAAAC GTTTTCCGGA AGGTGTGAGC
TACGTCGTGA GCTACGACCC CACGCAATAC ATTTCCGCCA CCATGGCGGA AATCGTGGAA
ACGCTTGTCA TCGCCCTGAT TCTGGTGGTG GGCATCACGT ACCTGTTCCT GCAGGACTGG
CGTGCCACGC TCATTCCGGC GCTCGCCATT CCCGTCTCCC TGATAGGCAC CTTCGCCATC
CTGCTGCCCC TGGGCTTTTC CATCAATGTG CTGACCATGT TCGGCCTTAT TCTAGTAATC
GGGTCCCTGG TGGACGACGG CATCATCGTA GTGGAAAATA CGATGCGCAT TCTGGAGACG
GAGGATCTCT CGCCGGAAGA AGCCACCAGG AAGAGCATGC ACCAGATTAC AGGCGCCATC
ATCGCCACCA CGCTGGTGAC GGTCGCCATT TACGTGCCCA TCGCCTTCTT CGGCGGCATG
GTAGGGAACA TTTACATGCA ATTCTCCGTA ACCATGTGCG TGGCCCTCTG CCTTTCCGCC
ATCAATTCCC TGACGCTCAG CCCCGCGCTG TGCGTTCTGC TGCTGAAAAG GAAGCAAAAG
AAACAGAGCA GGTTCAGCCT CTTCCGCCCC TTCAATGTCT CTCTGGAATG GGCGCGCAAA
AGCTATATCA AATGCGCCGG CATCATGGTG CGCCGCGCGT GGCTTACGCT GATTCTGCTG
GCCGCTGTCC TGGTCGGCAA CTGGAAACTG TTTGAGACCG TACCCAAATC CTTCCTTCCT
CCGGAAGACA AGGGCACCGT TTTCTGTGAT ATCCAGCTGG CCCCTGGCGC CACGCTGGGC
CGTACGGAAC AGGCCATGCG CAGTGCGGAA CAGAAGCTGA TGAGCATCCC CGGCGTGCGC
CAGGTTTCCT CCACTTCCGG ATTCAGCTTC ATGGGCGGCA ACGGGGAAAA CCTGGGCATG
TGCATCGCCC AGCTTGACCC CTGGGACAAA CGCAAGACGC CGGAGCTTTC CCTGGATTCC
ATCATGCAGA AAGCTTCCAT CCTGTGTGAT GAAATTCCGG CGGCCAAGGC CACCGTGTTC
AGCCCGCCCG CCATCATGGG GCTGGGCCTG ACGGGCGGCG TCTCCTTCAT GCTCCAGGCC
AGCGGGGAGG AAACTCCCAA GGACCTGGAA CGAGTGACCA ACGACCTGCT GGACAAAATC
AACAAACTGC CGGGAACCAT GTACGCCCGC AGCGCGTATG AGGCGAACAC CCCCCAGCTT
TTCCTGAACA TCGACCGTGA AAAGGCGCAG AGCATGCACG TGCCCGTCAG CCGCATCTTC
ACGACGCTTC AAAGCAAGCT GGCCTCCATG TACATCAATG ATTTCAACCT GATCGGCTAC
ACGTTCAAGG TGAAGATGCA GTCCGCGGCA GAGGACCGCA CCACCATCAA TGACATCATG
AACACCTACA TTCAGAACGA TCAGGGCCAG ATGGTGCCTC TCAGCTCCGT AGCCACCCTG
TCTTACATGG TGGGGCCGCG GCAAATATCC CGTTTCAACC AGCTCATGTC CGCAGAAGTG
ACCGCCCAGG CAAAACCCGG CGTCAGCAGC GGCGAGCTGA TGAACCAGAT TGAGGCTATT
CCGCTGCCGG AAAATTACTC CATCACCTGG ACGGACATGA GCTATCAGGA ACGGCAGAAC
GATGGGAAAA TCGTCCTGCT GATGGGTATG GCCCTGCTCT TCGGCTACCT GTTCCTGGTG
GCGCAATATG AAAGCTGGAC GGTTCCCATT TCCGTCATTG TCTCCGTCTC CGTCGCCCTG
TTGGGCGCTT TGCTCGGCCT GATTATCTGC AACACGCCCC TGAGCATTTA CGCTCAGCTC
GGCCTGGTGA TGCTGGTGGG CCTGGCCGGG AAAAACGCTA TTCTGATGGT GGAGTTCTCC
AAAATGGAGC GGGAGCGCGG CGTTCCCATC CAGGAAGCCG CCCTGGAAGG AGCCCGGCAG
CGCTTCCGCG CCGTGATGAT GACGGCCATT TCCTTCATCA TCGGGGTATT CCCCATGGTC
ATCGCCTCCG GAGCGGGCGC GGCAAGCCGC AAAGCCATTG GCATCTCCAC CTTCTACGGC
ATGATTCTCG CAACAGTAGT GGGCATTCTG TTCATTCCGG CCCTGTACGC CATGTTCCAG
CGTTACCGCG AATGGGTGAA AGGCCTGTTT GCCAGAAAGG CGGAATAA
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| Protein sequence | MIADLFIKRP KFAIVIAILM MLAGGICLNQ LPIAEYPEIA PTSINVQATY TGASAQVVME
TLASPIEEEL NGLENLLYFS SKSDNTGGYS LSLTFKSGTN SDINMVNVQN ALKRVEYKLP
KEVTDQGIKI KKRSSDILGF FAFRSTSMSS LELNNFVKTR VKDEVARVPG ISAVNLMPEK
NYSMRIWLDA LRMSALNITP DDVSNAIKAQ NVQAAAGSIG SEGENNFIQY KVNVTGRLQT
VEEFSKIIVR TGQDGHVTRL DDIARIELGA ETYTGSSRNN GEDSVNMAVY RLDDANALEA
MNGVKDTLEK LEKRFPEGVS YVVSYDPTQY ISATMAEIVE TLVIALILVV GITYLFLQDW
RATLIPALAI PVSLIGTFAI LLPLGFSINV LTMFGLILVI GSLVDDGIIV VENTMRILET
EDLSPEEATR KSMHQITGAI IATTLVTVAI YVPIAFFGGM VGNIYMQFSV TMCVALCLSA
INSLTLSPAL CVLLLKRKQK KQSRFSLFRP FNVSLEWARK SYIKCAGIMV RRAWLTLILL
AAVLVGNWKL FETVPKSFLP PEDKGTVFCD IQLAPGATLG RTEQAMRSAE QKLMSIPGVR
QVSSTSGFSF MGGNGENLGM CIAQLDPWDK RKTPELSLDS IMQKASILCD EIPAAKATVF
SPPAIMGLGL TGGVSFMLQA SGEETPKDLE RVTNDLLDKI NKLPGTMYAR SAYEANTPQL
FLNIDREKAQ SMHVPVSRIF TTLQSKLASM YINDFNLIGY TFKVKMQSAA EDRTTINDIM
NTYIQNDQGQ MVPLSSVATL SYMVGPRQIS RFNQLMSAEV TAQAKPGVSS GELMNQIEAI
PLPENYSITW TDMSYQERQN DGKIVLLMGM ALLFGYLFLV AQYESWTVPI SVIVSVSVAL
LGALLGLIIC NTPLSIYAQL GLVMLVGLAG KNAILMVEFS KMERERGVPI QEAALEGARQ
RFRAVMMTAI SFIIGVFPMV IASGAGAASR KAIGISTFYG MILATVVGIL FIPALYAMFQ
RYREWVKGLF ARKAE
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