| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2008 |
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| Symbol | |
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| ID | 6275643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2439026 |
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| End bp | 2439337 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642614067 |
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| Product | CRISPR-associated protein Cas2 |
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| Protein accession | YP_001878599 |
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| Protein GI | 187736487 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3512] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.959025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.141931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCTGGC TAGTTGTGTT CTTTGATCTT CCCACAACCA CGCCGGAAGA TAAAAAAAAC
TATCAATATT TCCGTAAGGC TCTTTTAGAA GACGGCTATA CGATGATTCA GTATAGCGTC
TATGCCCGCG CGTGCGTTAC TCAGGAAAGA ATGGCTACCC ACTCCCGCAG AATCCAGAAA
ATGATACCGC CTGATGGTTC TGTCCGCTGT CTTTTCGTTA CGAATATCCA GTGGGATAAG
ATGTTCGTTT TTCATGGCAG GTCTTGTCCC CGACAGGAGG TTTCCCTGCC TCAGCAGATG
CTCCTCTGGT AA
|
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| Protein sequence | MGWLVVFFDL PTTTPEDKKN YQYFRKALLE DGYTMIQYSV YARACVTQER MATHSRRIQK
MIPPDGSVRC LFVTNIQWDK MFVFHGRSCP RQEVSLPQQM LLW
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