| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2002 |
|---|
| Symbol | |
|---|
| ID | 6275653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2433034 |
|---|
| End bp | 2434875 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 613 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642614062 |
|---|
| Product | heat shock protein 90 |
|---|
| Protein accession | YP_001878594 |
|---|
| Protein GI | 187736482 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0326] Molecular chaperone, HSP90 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.240397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAG AAACACATCA ATTTCAGGCG GAAGTCCGGC AGCTGCTGGA CATTGTCATC
AACGCCCTTT ACAGCGACCG TGAAATCTTT GTCCGCGAAC TTGTCTCCAA CGCTTCCGAC
GCCCTGGAAA AACTGCGCCT GAAGCAGCTG ACGGACTCCA ATATTTACCA GCCGGACAAG
CCCCTGGAAA TCACTGTAGC CACGGATAAG GAAAACAAAA CCATCACCAT CGCGGATACC
GGCATCGGGA TGACGGAAGC GGACCTGGTG GAAAACCTGG GAACCATCGC CCACTCCGGC
ACCAAAAAAT TCATGGAAGC CCTTAAGCAG AAGCAGGAAG GCGGAGCGGA CCTGATCGGT
CAGTTCGGCG TGGGCTTCTA CAGCTCTTTC ATGGTGGCGG ACCGCGTGGA AGTGTTCACC
CGCTCCTATG AACCGGAAGC CGCCTCCCTG CGCTGGTCTT CCGACGGACG GGAAGGCTAC
AGCATCGAAA CGCTGGCGGA ACCGCTGGAC CGGGGCACCC GCATCGTCAT CCGCCTGAAA
GACGAATATG AAGAATTTTC CCAGGAATAC CGCGTCAAGG AACTCCTGCG CCGCTACTCC
AACTTCGTGG GGTTCCCCCT CAACTTCAAC GGAGAACACA TCAACACCGT CCAGGCCATC
TGGTCCAAGT CCAAATCCGA CGTGAAGCCG GAGGAATATG ACGAGTTTTA CCAGTTCATC
TCCCATACGG ATGAAAAGCC CCTGTCCTAC ATGCACTTCA GCGCGGACGC CCCTATTGCC
CTGAATGCCC TGCTTTTCAT CCCCAGGCGC AATCCGGAAA TGTTCGGATT CGGCCGCGTG
GACGCCAACG TGGCCCTGTA CTGCAAGCGC GTGCTGATTG ACGCCAAGCC GGAAGGCCTG
CTGCCGGAAT GGCTCCGCTT CCTGAACGGC GTGGTGGACA GCGAAGACCT GCCCCTGAAC
ATTTCCCGCG AAATGCTTCA GGACAATTCC CTGGTACGCA AAATCAGCGA CATCATCACC
AGGCGCTTCA TCAAGCATCT GGAAAAACTG GCGAAGGACG ACAAGGAAAC CTACAGGGAA
TTCTACGCGC AATTCTCCCG CTACCTGAAA GAAGGCGTCG TCACCTCCTG GCCGAACAAG
GAATCCCTGG GCAAGCTGCT CCGTTTTGAA TCCACGTCCA CGGAACCGGG GGAAACGACC
TCATTTGAGG AATACCTTAC CCGCATGAAG GAAGGGCAGA CGGCCATTTA CGCGCTTACC
GGCCCTTCCC GCTCCCATCT GGAAAACAGC CCGTACCTGG AAGCCTTCAA GGCCCGCGGC
TATGAAGTGG CCTTCTTCAC GGACCACGGG GACGAATTCG TGCTGGACTC CCTGTCCAGC
GTGGACGGCA AGCCCGTCAC GATGATCGAC CGCGCCGACG TGGAACTCCC CGCCCTGGAA
GAGGAACAGA AGGACGCCCT GCCCCAGGAG GAAGCCGCGG CCCTGGAAGA ATGGCTGAAA
GGACTGTACC CGGACAAATT CTCCAAAGTC ACCCTGGGCA AGCGCCTGGT CAGCGGAGCC
GCCGTAGCCC TGCAAAGCGG CAATGACATG GGGCCGGAAA TGAGGGCGTA CATGAAAGCC
ATGGGGCAGG AAGTGCCGGA AAGCCACCCG CAGCTGGAAC TGAACCCCTC CAACCCTCTG
GTGAAAAAGC TTTCCGCCCT GCGGACGGAA AACCCGGAAC TGGCGCAAAT GGTGGCGGAC
CAGATCGCGA ATACCGCCCT GCTCCGCGCC GGCATGCTGG ACGATCCCGC CGTGCTGGCC
CAGTCCTCCC AGGCCCTGAT GGAACAGCTC CTGCTGAAGT AG
|
|---|
| Protein sequence | MNTETHQFQA EVRQLLDIVI NALYSDREIF VRELVSNASD ALEKLRLKQL TDSNIYQPDK
PLEITVATDK ENKTITIADT GIGMTEADLV ENLGTIAHSG TKKFMEALKQ KQEGGADLIG
QFGVGFYSSF MVADRVEVFT RSYEPEAASL RWSSDGREGY SIETLAEPLD RGTRIVIRLK
DEYEEFSQEY RVKELLRRYS NFVGFPLNFN GEHINTVQAI WSKSKSDVKP EEYDEFYQFI
SHTDEKPLSY MHFSADAPIA LNALLFIPRR NPEMFGFGRV DANVALYCKR VLIDAKPEGL
LPEWLRFLNG VVDSEDLPLN ISREMLQDNS LVRKISDIIT RRFIKHLEKL AKDDKETYRE
FYAQFSRYLK EGVVTSWPNK ESLGKLLRFE STSTEPGETT SFEEYLTRMK EGQTAIYALT
GPSRSHLENS PYLEAFKARG YEVAFFTDHG DEFVLDSLSS VDGKPVTMID RADVELPALE
EEQKDALPQE EAAALEEWLK GLYPDKFSKV TLGKRLVSGA AVALQSGNDM GPEMRAYMKA
MGQEVPESHP QLELNPSNPL VKKLSALRTE NPELAQMVAD QIANTALLRA GMLDDPAVLA
QSSQALMEQL LLK
|
|---|
| |