Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_2001 |
Symbol | |
ID | 6274550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2430986 |
End bp | 2433025 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642614061 |
Product | putative lipoprotein |
Protein accession | YP_001878593 |
Protein GI | 187736481 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.629311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.117944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTGCG AGCGTCATTA TACGGCCCCC GTCAAGGGGG ATGGACAGTT TTTTTCCCTG GGCCTGAGCG TTCCATGTCA CACAAAGGGG CTTTTTCCCG GGCATGGGAG GGGCCGGGCG TTTTTCCTTG AAACAATTCC GGAAACTGAA CAGTATTATT TAACAAATAT GATTTTCTCA CCATTGTTGA AAAAGGGGGT TCTTTTATTG GCCCTCTGCG GCGTGCTGGG CGGCGGCGTG CTTTCCGCCC AGGAAGCAGG GGGTGCGCCG ATTACGGAGG AGGGTTTGAA AGCATTGGAT TCCAATGTGT TCGCCAATGA ATACATGCTG GCGTTGAAGC CCAATGTCAC GCGCGACCGC ATCGCCAGAA TCAAGGACCC CTTTGTGCGC GGGCTCGCCA CGCGGATGGC GGAGAAGAAA TTTGACCGCA AGGCCCGCGC CCTTACGGCG GAACCGTATG AACCGGTCAA GGATCTGGCG GAACGCCTGC GTACCAGCCA GTACAGCAAA TTTGAAAATC CCACCGGCAT CTTTTTTGAG GAGGGGGAGG ACGTGTTGCT GGTCATGGGG GATCCCAAAG GTGAAAAGCT GAATCTGGTT ATCCACAACT TCGGGCGGGA CGGAGGCCAC AGCTCCTATC CGCTGAAGGA GGGGGTCAAC ATCATCAGGG CGAAGAACAA GGGGCTTGGC TACATTGAGT ATTTCACCCC CAATTATAAG AAGGCTCCCA AGGTGCATTT ATCCATTTTG TCCGGCAAGG TGAACGGAGT TTTCGTGGGA GGAGTCAGCA AAAACAGCGA CTGGAAGAAG ATGCTGGAAA ACTCCCCCAC GGAAGTTGTG GACATCGTGG GCAGCCGCGT GCATCTGGTG TATCCGGTGG AGGAACTTAA ACAATTCTGT CCGGACAAGG GGGAGGAGCT TATTGCCCTG TACGACAGGA TTATCGGCAT GGAGCAGCAG ATCATGGGCT TGTACAAGTA CAGGATGCTG CCCAAAAACC GCATGTTCGG CCGTGTGATC TGGAACGGGT TCATGCACGC GGACGGCACG GGGGCCGCCT TTCATAACGG CACCATGAAG GAGGTCGGCA ATCCGGACAG GATTCCCGGC AGCGCCTGGG GGATTGCCCA TGAGTTCGGC CACGTCAACC AGGTGCGCCC CGCCATGAAA TGGGTCTCCA CCGGAGAAGT GACCAATAAC ATTTACTCCG CTTACGTGAA TTACATGCTG AATCCCTCCA GCATGCGCCT GGAGCATGAA CGCATCAACG GCGGGGACGG CAACATGATT GGCGGACGCT TCAACGCCTA TCTGAACAAC GGCATTTTGA AGGGGGAAAA CTGGCTTGTC CAGAGCGGGC CGGACAAGCG TTCCGGCGGG GATAACCGTC CGATGGTGCA CGACCATTTT GTCAAGCTGG CCCCCCTGTG GCAGCTTGAG CTGTATTTCA AGGTAGCCGG GAAGGGTAAT CCCGACTTTT ATCCGGATAT CTTTTATAAG GCCATCAAGA TGGATACCAG GGGCAAGAAG GACGGCGAGC TCCAGCTTGC GTTCATGAAG AACGCCTGCG ACGCCGCCAG ACAGGACCTG ACGGATTTTT TCCGGAAAAC GGGCATGCTC AAGCCCATTG ACCAGGAATT GGACGACTAC ACCTGCGCCC GCATGACCAT CACGGAGGCC GACTGCAAGA ACCTGATTGC CTACGCCAGG AAGTACAAAA AGCCGGAAAG CCCCGTCATT TACTATATTT CCGTCAACAG CGCGGAAGCA TATAAGAACC GACTGCCTGT CCGCGGCGTT TACAACCAGG GCGTTACGGA GCAGGGCAAC AGGCGCGTTG TTTCCCATGA CGTGTGGAAA AACGCCGTCG TCTTTGAAAC ATACAAAGAC AGGGAAATGG TCCGCATCAC CATGGTGGGG ACAGATTCCA GGGATAATTC CTCCACCACG GTTCCCTATC CGGAAGGTTC TACGCGGATT GAAGCCGTTT CCTGGGACGG CAGGCGGACG CTGGTGTACG GCAAACGCCC TGCCAAATGA
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Protein sequence | MFCERHYTAP VKGDGQFFSL GLSVPCHTKG LFPGHGRGRA FFLETIPETE QYYLTNMIFS PLLKKGVLLL ALCGVLGGGV LSAQEAGGAP ITEEGLKALD SNVFANEYML ALKPNVTRDR IARIKDPFVR GLATRMAEKK FDRKARALTA EPYEPVKDLA ERLRTSQYSK FENPTGIFFE EGEDVLLVMG DPKGEKLNLV IHNFGRDGGH SSYPLKEGVN IIRAKNKGLG YIEYFTPNYK KAPKVHLSIL SGKVNGVFVG GVSKNSDWKK MLENSPTEVV DIVGSRVHLV YPVEELKQFC PDKGEELIAL YDRIIGMEQQ IMGLYKYRML PKNRMFGRVI WNGFMHADGT GAAFHNGTMK EVGNPDRIPG SAWGIAHEFG HVNQVRPAMK WVSTGEVTNN IYSAYVNYML NPSSMRLEHE RINGGDGNMI GGRFNAYLNN GILKGENWLV QSGPDKRSGG DNRPMVHDHF VKLAPLWQLE LYFKVAGKGN PDFYPDIFYK AIKMDTRGKK DGELQLAFMK NACDAARQDL TDFFRKTGML KPIDQELDDY TCARMTITEA DCKNLIAYAR KYKKPESPVI YYISVNSAEA YKNRLPVRGV YNQGVTEQGN RRVVSHDVWK NAVVFETYKD REMVRITMVG TDSRDNSSTT VPYPEGSTRI EAVSWDGRRT LVYGKRPAK
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