Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1962 |
Symbol | |
ID | 6275007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2381426 |
End bp | 2382202 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642614023 |
Product | protein of unknown function DUF1212 |
Protein accession | YP_001878556 |
Protein GI | 187736444 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0150285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.00184472 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGCATA CCGACCAGAT ACAGGCCCTT TCGGAATTCC TGCTGGAATA CGCCACCACC CTCATGGGCG CGGGGGTGCA CACCAACCGC GCCGTGCGCA ACATTTCCCG CATTGCCTCC GCGTACGGAT ACAGCGCGGA CATGACCATT TTCCAGCGCA ATATCACCAT GAGCCTGATC TGCAAGGATG ACGAGACGCT GCGCCGCACC TCCGTCCGGA AACTGAAACC CCTGGCGTTC AACCTGAACC TGATCCAGCA GCTCAGTGAA TTGAGCTGGC TCCCGGTGGA CAACAACGTC AGCATTGCGG AAATGGAACA GGCATTCCGC TCCATGGTGC GCACCAAAAG ATTTTCCCGC TGGACGGACC TGCTCCTGGT CAGCGTAGGC AACGCCGCCT TCTGCCGCCT GTTTAACGGA GACCTGTGGG CCATGCTGAC CGTGTTCGCC GCCACCATGC TGGGCTTTCT GGCCAAGCAG CAGCTTACCC GGTTGAAATA CAACCCGCTG GGGGTCATCA TCCTTTCCGC CTTCACCGCT TCCATGGCAG CCGCGTGCGC CGTCCTTTTC CAGATAGGCT CCACGCCGCA GATCGCCCTG GCAGCCAGCG TCCTGTTCCT GGTGCCCGGC GTCCAGATGA TCAACTCCAT CATGGACCTG ATGCACGGCC ACATCCTGAT GGGCATCTCC CGCGGCATCC ATTCCATCAT GATGATTGCC TGCATCGCCA TCGGCCTCTC CGCAACCATG CTCATCGTAG GGGTAAACAG CTTATGA
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Protein sequence | MQHTDQIQAL SEFLLEYATT LMGAGVHTNR AVRNISRIAS AYGYSADMTI FQRNITMSLI CKDDETLRRT SVRKLKPLAF NLNLIQQLSE LSWLPVDNNV SIAEMEQAFR SMVRTKRFSR WTDLLLVSVG NAAFCRLFNG DLWAMLTVFA ATMLGFLAKQ QLTRLKYNPL GVIILSAFTA SMAAACAVLF QIGSTPQIAL AASVLFLVPG VQMINSIMDL MHGHILMGIS RGIHSIMMIA CIAIGLSATM LIVGVNSL
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