Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1942 |
Symbol | |
ID | 6275172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2357359 |
End bp | 2358612 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642614002 |
Product | peptidase T |
Protein accession | YP_001878536 |
Protein GI | 187736424 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2195] Di- and tripeptidases |
TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.366024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.129304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCT CCGTTTTAGA CCGTTTTTTG AAGTATGTCT CCGTGGGCTC TCAGTCGGAC GCGGATTCCG CCACCGTGCC ATCCACCCCC GGCCAGACGG AGCTGGCCCG GCTGTTGGCC GGGGAATTGA AGGACATGGG AGCGCAGGCG GAACTGGATG ATGATTCCGG AATTGTTTAC GCCTCCATCC CTTCCAACGT GGAGGGGAAT GTTCCCGTCA TCGGCTGGGT GGCCCATGTG GATACGGCTC CGGGAGTCTC CGGCAGCGGA GTGAAGCCCC GCATCGTGCG CTCGTACGAC GGCGGAGACA TCCTGCTCAA TCCGGAACAG GGAATGGTGC TTTCCCCCGC CGTTTTTCCC GAACTGACGG ATTATTTGGG CCAGGACCTG GTCGTGACGG ATGGAACTAC CCTGCTTGGC GCGGACGACA AGGCCGGTGT GGCGGAAATC ATGGATATGG CAGCCTCCTT CCTGCTGAAC CCCGAACGGC CTCACGGCGA GATACGGATC GCCTTCACGC CGGATGAGGA AATAGGACGC GGAACGGATG CCTTTGACGT GGCGCGATTT GGTGCGGATT TCGCCTATAC CGTGGACGGA GGCGCCCTGG GGGAAATTGA ATACGAAAAT TTCAATGCGG CTTCCGCAGT GGTGACGGTG CAGGGCTCTT CCATTCATCC CGGAAGCGCC AAGGGCAGGA TGTTGAATGC CTGCCTGGTT CTCATGGAAT TCCAGGGAAT GCTGCCCGCG TTCCAGAATC CCGCTTTTAC GGAAGGGTAC GAGGGCTTTT ATCATTTGGA TTCACTCCGG GGAGATGTGG AACGGGCGGC TGCGGAGTAC CTCATCAGGG ATCATGACAG GGAGGCCTTT GAGCGCAAGA AGGAATTCAT GCAGGAATGT GCGGCCCTGC TGAACCGTAA ATACGGGGAG GGGACGGTAA AGGCGGAAAT TACGGATTCC TATTACAACA TGAAGGAAAA GATACTTCCG CACATGCACC TGGTGGAACA TGCCCGCAGG GCCATGGAAG CCGTGGGAGT GAGGCCGGAA ATCGTCCCTG TGCGCGGAGG CACGGACGGA GCCCACCTCT CCTTCATGGG GCTGCCGTGC CCCAACCTGT GCGCCGGAGG CCACAACTTC CATGGAAAGT ATGAATACGT CCCCGTCCGT TCCCTGGAAA AAATTTCCGC CATCCTTCAG GAAATCGTCT CCGGTTATGC CCGGTACGGC CTGGAGCCGC CGCCAAGGGA ATGA
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Protein sequence | MNISVLDRFL KYVSVGSQSD ADSATVPSTP GQTELARLLA GELKDMGAQA ELDDDSGIVY ASIPSNVEGN VPVIGWVAHV DTAPGVSGSG VKPRIVRSYD GGDILLNPEQ GMVLSPAVFP ELTDYLGQDL VVTDGTTLLG ADDKAGVAEI MDMAASFLLN PERPHGEIRI AFTPDEEIGR GTDAFDVARF GADFAYTVDG GALGEIEYEN FNAASAVVTV QGSSIHPGSA KGRMLNACLV LMEFQGMLPA FQNPAFTEGY EGFYHLDSLR GDVERAAAEY LIRDHDREAF ERKKEFMQEC AALLNRKYGE GTVKAEITDS YYNMKEKILP HMHLVEHARR AMEAVGVRPE IVPVRGGTDG AHLSFMGLPC PNLCAGGHNF HGKYEYVPVR SLEKISAILQ EIVSGYARYG LEPPPRE
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