Gene Amuc_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1935 
Symbol 
ID6275216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2348584 
End bp2349183 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content48% 
IMG OID642613995 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001878529 
Protein GI187736417 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.775828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.0634472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA GCAGAATCAG AATTGCAACG AGGCGGGATG CGGCCAAGCT GCTGGAAATT 
TACGCTCCGT ATGTGGAAAA GACAGCTGTC ACGTTTGAAT ATGAAGTGCC TGCAGTGACG
GAGTTTGAAA AAAGAATAGA TCACGTACTG GGAAAATACC CCTATTTGGT TGCGGAAAGG
GCAGGGGATA TTTCCGGTTA TGCCTATGCA GGAGTGTTCA AGGACCGCGC AGCGTATCGC
TGGGCTGTGG AAACGACGGT ATACGTGCGG GAAGACATGA AAAAAATGGG AACGGGAAGG
GAACTGTATG CAGCTCTGGA AAAGATTCTC TCCATGCAGA ATATTTTGAA TTTAAACGCG
TGCATTGCTT ATCCCTGTGA AGCTGAGGAC CCCTATCTTA CACGGGACAG CGTCCAGTTC
CATAAACGTT TGGGGTATCA ATTTGCAGGG AAATTTCATC GGTGCGGATA CAAATTCGGC
CGTTGGTACC ATATGATCTG GATGGAGAAG TTTCTCGGAG GCCATACGGA AAATCCGCCC
GCAGTGGAAT CTTTTGGCGA GGTAAGGAGC CTTGTCGCGG AGAAATTCGG AATTTGGTGA
 
Protein sequence
MKSSRIRIAT RRDAAKLLEI YAPYVEKTAV TFEYEVPAVT EFEKRIDHVL GKYPYLVAER 
AGDISGYAYA GVFKDRAAYR WAVETTVYVR EDMKKMGTGR ELYAALEKIL SMQNILNLNA
CIAYPCEAED PYLTRDSVQF HKRLGYQFAG KFHRCGYKFG RWYHMIWMEK FLGGHTENPP
AVESFGEVRS LVAEKFGIW